RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 ZNF213O14771 459 aa26.54■■□□□ 1.84
SIX3-201ENST00000260653 NECAB1Q8N987 351 aa26.54■■□□□ 1.84
SIX3-201ENST00000260653 ZNF384Q8TF68 577 aa26.54■■□□□ 1.84
SIX3-201ENST00000260653 EPB41L4AQ9HCS5 686 aaPredicted RBP26.54■■□□□ 1.84
SIX3-201ENST00000260653 ZDHHC9Q9Y397 364 aa26.54■■□□□ 1.84
SIX3-201ENST00000260653 COL11A2P13942 1736 aaPredicted RBP26.54■■□□□ 1.84
SIX3-201ENST00000260653 LRRC37AA6NMS7 1700 aa26.53■■□□□ 1.84
SIX3-201ENST00000260653 PPEF1O14829 653 aaPredicted RBP26.53■■□□□ 1.84
SIX3-201ENST00000260653 PRKAB2O43741 272 aa26.53■■□□□ 1.84
SIX3-201ENST00000260653 DEFB132Q7Z7B7 95 aa26.53■■□□□ 1.84
SIX3-201ENST00000260653 NBPF3Q9H094 633 aa26.53■■□□□ 1.84
SIX3-201ENST00000260653 GGA1Q9UJY5 639 aa26.53■■□□□ 1.84
SIX3-201ENST00000260653 PATL2C9JE40 543 aaKnown RBP26.52■■□□□ 1.84
SIX3-201ENST00000260653 EXOSC10Q01780 885 aaKnown RBP26.52■■□□□ 1.84
SIX3-201ENST00000260653 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.52■■□□□ 1.84
SIX3-201ENST00000260653 DTNBO60941 627 aa26.51■■□□□ 1.84
SIX3-201ENST00000260653 ATP2B4P23634 1241 aa26.51■■□□□ 1.84
SIX3-201ENST00000260653 C15orf52Q6ZUT6 534 aaKnown RBP26.51■■□□□ 1.84
SIX3-201ENST00000260653 GSG1L2A8MUP6 293 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 NPR1P16066 1061 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 PRDX5P30044 214 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 PDE6BP35913 854 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 CHST3Q7LGC8 479 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 ZNF804AQ7Z570 1209 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 IFNL3Q8IZI9 196 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 BRF1Q92994 677 aa26.51■■□□□ 1.83
SIX3-201ENST00000260653 NAA16Q6N069 864 aaPredicted RBP26.5■■□□□ 1.83
SIX3-201ENST00000260653 POLLQ9UGP5 575 aa26.5■■□□□ 1.83
SIX3-201ENST00000260653 SLC4A4Q9Y6R1 1079 aa26.5■■□□□ 1.83
SIX3-201ENST00000260653 LTBP1Q14766 1721 aa26.5■■□□□ 1.83
SIX3-201ENST00000260653 FGD1P98174 961 aa26.5■■□□□ 1.83
SIX3-201ENST00000260653 SF3B2Q13435 895 aaKnown RBP26.5■■□□□ 1.83
SIX3-201ENST00000260653 ALX1Q15699 326 aa26.5■■□□□ 1.83
SIX3-201ENST00000260653 TDRD7Q8NHU6 1098 aaKnown RBP26.5■■□□□ 1.83
SIX3-201ENST00000260653 NSUN4Q96CB9 384 aaKnown RBP26.5■■□□□ 1.83
SIX3-201ENST00000260653 GBP4Q96PP9 640 aa26.5■■□□□ 1.83
SIX3-201ENST00000260653 MECOMQ03112 1051 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 TBC1D10CQ8IV04 446 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 QSER1Q2KHR3 1735 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 ZMYM6O95789 1325 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 ZBTB22O15209 634 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 BAG6P46379 1132 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 STK3Q13188 491 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 TMC4Q7Z404 712 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 TBC1D16Q8TBP0 767 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 NAPBQ9H115 298 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 SMC3Q9UQE7 1217 aa26.49■■□□□ 1.83
SIX3-201ENST00000260653 MAGEB6P1A0A0J9YX57 407 aa26.48■■□□□ 1.83
SIX3-201ENST00000260653 GNAT2P19087 354 aa26.48■■□□□ 1.83
SIX3-201ENST00000260653 SP8Q8IXZ3 490 aa26.48■■□□□ 1.83
SIX3-201ENST00000260653 FOXD4L5Q5VV16 416 aaPredicted RBP26.48■■□□□ 1.83
SIX3-201ENST00000260653 FOXD4L4Q8WXT5 416 aaPredicted RBP26.48■■□□□ 1.83
SIX3-201ENST00000260653 RIOK1Q9BRS2 568 aaKnown RBP26.48■■□□□ 1.83
SIX3-201ENST00000260653 ATP6V0A2Q9Y487 856 aa26.48■■□□□ 1.83
SIX3-201ENST00000260653 OLFM4Q6UX06 510 aa26.47■■□□□ 1.83
SIX3-201ENST00000260653 MB21D2Q8IYB1 491 aaPredicted RBP26.47■■□□□ 1.83
SIX3-201ENST00000260653 AGXT2Q9BYV1 514 aa26.47■■□□□ 1.83
SIX3-201ENST00000260653 PDGFDQ9GZP0 370 aaPredicted RBP26.47■■□□□ 1.83
SIX3-201ENST00000260653 BRD1O95696 1058 aa26.46■■□□□ 1.83
SIX3-201ENST00000260653 CLEC17AQ6ZS10 378 aa26.46■■□□□ 1.83
SIX3-201ENST00000260653 NCOA7Q8NI08 942 aa26.46■■□□□ 1.83
SIX3-201ENST00000260653 CCDC88AQ3V6T2 1871 aa26.46■■□□□ 1.83
SIX3-201ENST00000260653 MAST2Q6P0Q8 1798 aa26.46■■□□□ 1.83
SIX3-201ENST00000260653 DYNLL1P63167 89 aaKnown RBP26.46■■□□□ 1.83
SIX3-201ENST00000260653 MASTLQ96GX5 879 aa26.46■■□□□ 1.83
SIX3-201ENST00000260653 C6orf229H3BNL8 230 aa26.45■■□□□ 1.83
SIX3-201ENST00000260653 TDO2P48775 406 aa26.45■■□□□ 1.83
SIX3-201ENST00000260653 RALYLQ86SE5 291 aaKnown RBP26.45■■□□□ 1.83
SIX3-201ENST00000260653 SDR42E1Q8WUS8 393 aa26.45■■□□□ 1.83
SIX3-201ENST00000260653 CD209Q9NNX6 404 aa26.45■■□□□ 1.83
SIX3-201ENST00000260653 BAG4O95429 457 aaKnown RBP26.45■■□□□ 1.82
SIX3-201ENST00000260653 GJB2P29033 226 aa26.45■■□□□ 1.82
SIX3-201ENST00000260653 APOBRQ0VD83 1088 aa26.45■■□□□ 1.82
SIX3-201ENST00000260653 NACAP1Q9BZK3 213 aa26.45■■□□□ 1.82
SIX3-201ENST00000260653 ALDH1B1P30837 517 aa26.44■■□□□ 1.82
SIX3-201ENST00000260653 WDR66Q8TBY9 1149 aa26.44■■□□□ 1.82
SIX3-201ENST00000260653 DDX11L8A8MPP1 907 aa26.44■■□□□ 1.82
SIX3-201ENST00000260653 NKX2-3Q8TAU0 364 aa26.44■■□□□ 1.82
SIX3-201ENST00000260653 SALL1Q9NSC2 1324 aa26.44■■□□□ 1.82
SIX3-201ENST00000260653 CHD4Q14839 1912 aa26.43■■□□□ 1.82
SIX3-201ENST00000260653 PRC1O43663 620 aa26.43■■□□□ 1.82
SIX3-201ENST00000260653 MCM5P33992 734 aa26.43■■□□□ 1.82
SIX3-201ENST00000260653 ANTXR2P58335 489 aa26.43■■□□□ 1.82
SIX3-201ENST00000260653 GTF3C6Q969F1 213 aa26.43■■□□□ 1.82
SIX3-201ENST00000260653 GPHNQ9NQX3 736 aaPredicted RBP26.43■■□□□ 1.82
SIX3-201ENST00000260653 CTDSPL2Q05D32 466 aa26.43■■□□□ 1.82
SIX3-201ENST00000260653 ZNF622Q969S3 477 aaKnown RBP eCLIP26.43■■□□□ 1.82
SIX3-201ENST00000260653 TRDNQ13061 729 aa26.42■■□□□ 1.82
SIX3-201ENST00000260653 C2CD5Q86YS7 1000 aa26.42■■□□□ 1.82
SIX3-201ENST00000260653 NEDD4P46934 1319 aa26.42■■□□□ 1.82
SIX3-201ENST00000260653 DUOX1Q9NRD9 1551 aa26.42■■□□□ 1.82
SIX3-201ENST00000260653 IL1R1P14778 569 aa26.42■■□□□ 1.82
SIX3-201ENST00000260653 SPTY2D1Q68D10 685 aaPredicted RBP26.42■■□□□ 1.82
SIX3-201ENST00000260653 DZIP1Q86YF9 867 aaKnown RBP26.42■■□□□ 1.82
SIX3-201ENST00000260653 INCENPQ9NQS7 918 aa26.42■■□□□ 1.82
SIX3-201ENST00000260653 GRIK5Q16478 980 aa26.41■■□□□ 1.82
SIX3-201ENST00000260653 TIAM2Q8IVF5 1701 aa26.41■■□□□ 1.82
SIX3-201ENST00000260653 SYT1P21579 422 aa26.41■■□□□ 1.82
SIX3-201ENST00000260653 AATFQ9NY61 560 aaKnown RBP eCLIP26.41■■□□□ 1.82
SIX3-201ENST00000260653 LDHBP07195 334 aaKnown RBP26.4■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms