RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SERPINA10Q9UK55 444 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 RFX7Q2KHR2 1363 aa17.14■□□□□ 0.33
VPS25-201ENST00000253794 IQCA1LA6NCM1 817 aa17.13■□□□□ 0.33
VPS25-201ENST00000253794 POTECB2RU33 542 aa17.13■□□□□ 0.33
VPS25-201ENST00000253794 HHIPL2Q6UWX4 724 aa17.13■□□□□ 0.33
VPS25-201ENST00000253794 KIAA0825Q8IV33 1275 aa17.13■□□□□ 0.33
VPS25-201ENST00000253794 OGFOD1Q8N543 542 aa17.13■□□□□ 0.33
VPS25-201ENST00000253794 EVI5LQ96CN4 794 aa17.13■□□□□ 0.33
VPS25-201ENST00000253794 EDC3Q96F86 508 aaKnown RBP17.13■□□□□ 0.33
VPS25-201ENST00000253794 ZBED3Q96IU2 234 aaPredicted RBP17.13■□□□□ 0.33
VPS25-201ENST00000253794 CNOT7Q9UIV1 285 aaKnown RBP17.13■□□□□ 0.33
VPS25-201ENST00000253794 TTF2Q9UNY4 1162 aaKnown RBP17.13■□□□□ 0.33
VPS25-201ENST00000253794 GSPT1P15170 499 aaKnown RBP17.12■□□□□ 0.33
VPS25-201ENST00000253794 MECOMQ03112 1051 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 MICALL2Q8IY33 904 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 LRP2BPQ9P2M1 347 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 HACL1Q9UJ83 578 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 HDAC9Q9UKV0 1011 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 GAKO14976 1311 aa17.12■□□□□ 0.33
VPS25-201ENST00000253794 LMOD1P29536 600 aaPredicted RBP17.11■□□□□ 0.33
VPS25-201ENST00000253794 SLF2Q8IX21 1173 aa17.11■□□□□ 0.33
VPS25-201ENST00000253794 ADARB2Q9NS39 739 aaKnown RBP17.11■□□□□ 0.33
VPS25-201ENST00000253794 H7C1D1 291 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 EPS15P42566 896 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 GSTO1P78417 241 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 BMP2KLQ5H9B9 411 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 SKAP1Q86WV1 359 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 DZIP1Q86YF9 867 aaKnown RBP17.1■□□□□ 0.33
VPS25-201ENST00000253794 CNTROBQ8N137 903 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 TEKT1Q969V4 418 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 ZDHHC15Q96MV8 337 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.1■□□□□ 0.33
VPS25-201ENST00000253794 MYOZ2Q9NPC6 264 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
VPS25-201ENST00000253794 TCRBV5S4A2TA0A5A2 114 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 SHTN1A0MZ66 631 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 IDH1O75874 414 aaKnown RBP17.09■□□□□ 0.33
VPS25-201ENST00000253794 LDHCP07864 332 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
VPS25-201ENST00000253794 PDE6AP16499 860 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 ADD2P35612 726 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 CRKP46108 304 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 UBE3CQ15386 1083 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 LRRFIP1Q32MZ4 808 aaKnown RBP17.09■□□□□ 0.33
VPS25-201ENST00000253794 ZSCAN25Q6NSZ9 544 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 USP50Q70EL3 339 aaPredicted RBP17.09■□□□□ 0.33
VPS25-201ENST00000253794 TAF1DQ9H5J8 278 aaPredicted RBP17.09■□□□□ 0.33
VPS25-201ENST00000253794 MROH7-TTC4A0A0A0MT08 1334 aa17.09■□□□□ 0.33
VPS25-201ENST00000253794 MYO5AQ9Y4I1 1855 aaKnown RBP17.09■□□□□ 0.33
VPS25-201ENST00000253794 SPDYE2BA6NHP3 402 aa17.08■□□□□ 0.32
VPS25-201ENST00000253794 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
VPS25-201ENST00000253794 MAP4K4O95819 1239 aaPredicted RBP17.08■□□□□ 0.32
VPS25-201ENST00000253794 ZFYP08048 801 aaPredicted RBP17.08■□□□□ 0.32
VPS25-201ENST00000253794 SPDYE6P0CI01 402 aa17.08■□□□□ 0.32
VPS25-201ENST00000253794 EPHX2P34913 555 aa17.08■□□□□ 0.32
VPS25-201ENST00000253794 DIXDC1Q155Q3 683 aa17.08■□□□□ 0.32
VPS25-201ENST00000253794 NAA16Q6N069 864 aaPredicted RBP17.08■□□□□ 0.32
VPS25-201ENST00000253794 DAGLAQ9Y4D2 1042 aa17.08■□□□□ 0.32
VPS25-201ENST00000253794 ADAMTSL1Q8N6G6 1762 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 GPR75-ASB3A0A0A6YYF3 556 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 SDSP20132 328 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 RGS3P49796 1198 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 PPP4CP60510 307 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 APOBEC3HQ6NTF7 200 aaKnown RBP17.07■□□□□ 0.32
VPS25-201ENST00000253794 PNMA8AQ86V59 439 aaPredicted RBP17.07■□□□□ 0.32
VPS25-201ENST00000253794 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 TRPM4Q8TD43 1214 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 MYH7P12883 1935 aa17.07■□□□□ 0.32
VPS25-201ENST00000253794 ZNF532Q9HCE3 1301 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 TRIM6-TRIM34B2RNG4 842 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 WNT10BO00744 389 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 RNF113AO15541 343 aaKnown RBP17.06■□□□□ 0.32
VPS25-201ENST00000253794 EGFRP00533 1210 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 YY1P25490 414 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
VPS25-201ENST00000253794 DLGAP5Q15398 846 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 ADGRA1Q86SQ6 560 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 ZC3H15Q8WU90 426 aaKnown RBP17.06■□□□□ 0.32
VPS25-201ENST00000253794 FSD1Q9BTV5 496 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 NMRK2Q9NPI5 230 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
VPS25-201ENST00000253794 CYP7A1P22680 504 aa17.05■□□□□ 0.32
VPS25-201ENST00000253794 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
VPS25-201ENST00000253794 MYH2Q9UKX2 1941 aa17.05■□□□□ 0.32
VPS25-201ENST00000253794 HIP1O00291 1037 aa17.04■□□□□ 0.32
VPS25-201ENST00000253794 ZMYM1Q5SVZ6 1142 aa17.04■□□□□ 0.32
VPS25-201ENST00000253794 APPBP2Q92624 585 aa17.04■□□□□ 0.32
VPS25-201ENST00000253794 PRMT6Q96LA8 375 aaPredicted RBP17.04■□□□□ 0.32
VPS25-201ENST00000253794 RIOK1Q9BRS2 568 aaKnown RBP17.04■□□□□ 0.32
VPS25-201ENST00000253794 GPBP1L1Q9HC44 474 aaPredicted RBP17.04■□□□□ 0.32
VPS25-201ENST00000253794 PCDHAC2Q9Y5I4 1007 aa17.04■□□□□ 0.32
VPS25-201ENST00000253794 ECM29Q5VYK3 1845 aa17.03■□□□□ 0.32
VPS25-201ENST00000253794 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms