RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 LAMB2P55268 1798 aa25.42■■□□□ 1.66
CLN6-201ENST00000249806 B4E1Z4 1266 aa25.42■■□□□ 1.66
CLN6-201ENST00000249806 UVSSAQ2YD98 709 aa25.42■■□□□ 1.66
CLN6-201ENST00000249806 HS1BP3Q53T59 392 aa25.42■■□□□ 1.66
CLN6-201ENST00000249806 OTUD7BQ6GQQ9 843 aa25.42■■□□□ 1.66
CLN6-201ENST00000249806 CHMP4CQ96CF2 233 aa25.42■■□□□ 1.66
CLN6-201ENST00000249806 EPB41L4AQ9HCS5 686 aaPredicted RBP25.42■■□□□ 1.66
CLN6-201ENST00000249806 PATL2C9JE40 543 aaKnown RBP25.41■■□□□ 1.66
CLN6-201ENST00000249806 NR1I2O75469 434 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 IFNL3Q8IZI9 196 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 BICD2Q8TD16 824 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 CDC5LQ99459 802 aaKnown RBP25.41■■□□□ 1.66
CLN6-201ENST00000249806 DOCK2Q92608 1830 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 BCORQ6W2J9 1755 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 WDR19Q8NEZ3 1342 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 ILDR1Q86SU0 546 aaPredicted RBP25.41■■□□□ 1.66
CLN6-201ENST00000249806 USP25Q9UHP3 1055 aa25.41■■□□□ 1.66
CLN6-201ENST00000249806 MYH15Q9Y2K3 1946 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 UBAP1LF5GYI3 381 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 FAM182BQ5T319 152 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 TBC1D9BQ66K14 1250 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 NEDD4P46934 1319 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 PRKAB2O43741 272 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 MAP3K11Q16584 847 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 USP28Q96RU2 1077 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 SENP2Q9HC62 589 aa25.4■■□□□ 1.66
CLN6-201ENST00000249806 ANGEL1Q9UNK9 670 aaKnown RBP25.4■■□□□ 1.66
CLN6-201ENST00000249806 DHX16O60231 1041 aaKnown RBP25.39■■□□□ 1.66
CLN6-201ENST00000249806 ANKRD18AQ8IVF6 992 aa25.39■■□□□ 1.66
CLN6-201ENST00000249806 CKAP2LQ8IYA6 745 aa25.39■■□□□ 1.66
CLN6-201ENST00000249806 TNMDQ9H2S6 317 aa25.39■■□□□ 1.66
CLN6-201ENST00000249806 BCL2L12Q9HB09 334 aa25.39■■□□□ 1.66
CLN6-201ENST00000249806 CPLX1O14810 134 aa25.39■■□□□ 1.65
CLN6-201ENST00000249806 CTDSPL2Q05D32 466 aa25.39■■□□□ 1.65
CLN6-201ENST00000249806 ALX1Q15699 326 aa25.39■■□□□ 1.65
CLN6-201ENST00000249806 NAPBQ9H115 298 aa25.39■■□□□ 1.65
CLN6-201ENST00000249806 GJB4Q9NTQ9 266 aa25.39■■□□□ 1.65
CLN6-201ENST00000249806 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.39■■□□□ 1.65
CLN6-201ENST00000249806 ORC3Q9UBD5 711 aaPredicted RBP25.39■■□□□ 1.65
CLN6-201ENST00000249806 GSG1L2A8MUP6 293 aa25.38■■□□□ 1.65
CLN6-201ENST00000249806 CCDC192P0DO97 292 aa25.38■■□□□ 1.65
CLN6-201ENST00000249806 MSNP26038 577 aaKnown RBP25.38■■□□□ 1.65
CLN6-201ENST00000249806 GTF2E1P29083 439 aaPredicted RBP25.38■■□□□ 1.65
CLN6-201ENST00000249806 GYG1P46976 350 aa25.38■■□□□ 1.65
CLN6-201ENST00000249806 SF3B3Q15393 1217 aaKnown RBP25.38■■□□□ 1.65
CLN6-201ENST00000249806 LRP2BPQ9P2M1 347 aa25.38■■□□□ 1.65
CLN6-201ENST00000249806 RCOR1Q9UKL0 485 aa25.38■■□□□ 1.65
CLN6-201ENST00000249806 NOL7Q9UMY1 257 aaKnown RBP25.38■■□□□ 1.65
CLN6-201ENST00000249806 RXRAP19793 462 aa25.37■■□□□ 1.65
CLN6-201ENST00000249806 LCORLQ8N3X6 602 aa25.37■■□□□ 1.65
CLN6-201ENST00000249806 TACC3Q9Y6A5 838 aa25.37■■□□□ 1.65
CLN6-201ENST00000249806 SH2B2O14492 632 aaPredicted RBP25.37■■□□□ 1.65
CLN6-201ENST00000249806 KLHL34Q8N239 644 aa25.37■■□□□ 1.65
CLN6-201ENST00000249806 MIGA1Q8NAN2 632 aa25.37■■□□□ 1.65
CLN6-201ENST00000249806 SRP68Q9UHB9 627 aaKnown RBP25.37■■□□□ 1.65
CLN6-201ENST00000249806 CNTNAP4Q9C0A0 1308 aa25.36■■□□□ 1.65
CLN6-201ENST00000249806 C8orf76Q96K31 380 aa25.36■■□□□ 1.65
CLN6-201ENST00000249806 DDX19AQ9NUU7 478 aaKnown RBP25.36■■□□□ 1.65
CLN6-201ENST00000249806 CELF1Q92879 486 aaKnown RBP25.36■■□□□ 1.65
CLN6-201ENST00000249806 ZNF831Q5JPB2 1677 aa25.36■■□□□ 1.65
CLN6-201ENST00000249806 IGDCC4Q8TDY8 1250 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 CLSTN2Q9H4D0 955 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 BSDC1Q9NW68 430 aaPredicted RBP25.35■■□□□ 1.65
CLN6-201ENST00000249806 SLC4A4Q9Y6R1 1079 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 FBXO18Q8NFZ0 1043 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 ZNF396Q96N95 335 aaPredicted RBP25.35■■□□□ 1.65
CLN6-201ENST00000249806 ZSWIM5Q9P217 1185 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 CCDC39Q9UFE4 941 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 ABCF2Q9UG63 623 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 MINPP1Q9UNW1 487 aa25.35■■□□□ 1.65
CLN6-201ENST00000249806 KDM4AO75164 1064 aa25.34■■□□□ 1.65
CLN6-201ENST00000249806 ADCY5O95622 1261 aa25.34■■□□□ 1.65
CLN6-201ENST00000249806 TYRO3Q06418 890 aa25.34■■□□□ 1.65
CLN6-201ENST00000249806 FNBP4Q8N3X1 1017 aaPredicted RBP25.34■■□□□ 1.65
CLN6-201ENST00000249806 CCDC24Q8N4L8 307 aa25.34■■□□□ 1.65
CLN6-201ENST00000249806 POLR3DP05423 398 aaPredicted RBP25.33■■□□□ 1.65
CLN6-201ENST00000249806 METAP2P50579 478 aaKnown RBP eCLIP25.33■■□□□ 1.65
CLN6-201ENST00000249806 APOA5Q6Q788 366 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 ADGRA1Q86SQ6 560 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 CCDC144CPQ8IYA2 1237 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 MPNDQ8N594 471 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 MRVI1Q9Y6F6 885 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 ZMYM6O95789 1325 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 CASZ1Q86V15 1759 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 PLCB2Q00722 1185 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 STK11IPQ8N1F8 1099 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 NARFQ9UHQ1 456 aa25.33■■□□□ 1.65
CLN6-201ENST00000249806 ZNF804BA4D1E1 1349 aa25.33■■□□□ 1.64
CLN6-201ENST00000249806 C4AP0C0L4 1744 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 C4BP0C0L5 1744 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 CDC27P30260 824 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 ATL3Q6DD88 541 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 RBM43Q6ZSC3 357 aaKnown RBP25.32■■□□□ 1.64
CLN6-201ENST00000249806 AMIGO3Q86WK7 504 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 MICU3Q86XE3 530 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 CCAR1Q8IX12 1150 aaKnown RBP25.32■■□□□ 1.64
CLN6-201ENST00000249806 TMEM87BQ96K49 555 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 LY9Q9HBG7 655 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 USP21Q9UK80 565 aa25.32■■□□□ 1.64
CLN6-201ENST00000249806 GNPATO15228 680 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms