RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 ORC3Q9UBD5 711 aaPredicted RBP23.09■■□□□ 1.29
HOXC13-201ENST00000243056 RTCBQ9Y3I0 505 aaKnown RBP23.09■■□□□ 1.29
HOXC13-201ENST00000243056 RFX5P48382 616 aaPredicted RBP23.08■■□□□ 1.29
HOXC13-201ENST00000243056 PTPN12Q05209 780 aaKnown RBP23.08■■□□□ 1.29
HOXC13-201ENST00000243056 DEF6Q9H4E7 631 aa23.08■■□□□ 1.29
HOXC13-201ENST00000243056 SASH1O94885 1247 aa23.08■■□□□ 1.28
HOXC13-201ENST00000243056 TBC1D8O95759 1140 aa23.08■■□□□ 1.28
HOXC13-201ENST00000243056 CDC25BP30305 580 aa23.08■■□□□ 1.28
HOXC13-201ENST00000243056 FILIP1Q7Z7B0 1213 aa23.08■■□□□ 1.28
HOXC13-201ENST00000243056 AK7Q96M32 723 aa23.08■■□□□ 1.28
HOXC13-201ENST00000243056 NUP62CLQ9H1M0 184 aa23.08■■□□□ 1.28
HOXC13-201ENST00000243056 CASTP20810 708 aaKnown RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 GSCP56915 257 aaPredicted RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 RABL6Q3YEC7 729 aaPredicted RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 DNAJC21Q5F1R6 531 aaKnown RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 TBC1D9BQ66K14 1250 aa23.07■■□□□ 1.28
HOXC13-201ENST00000243056 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 ELP1O95163 1332 aa23.07■■□□□ 1.28
HOXC13-201ENST00000243056 PCCAP05165 728 aaPredicted RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 ACTN2P35609 894 aa23.07■■□□□ 1.28
HOXC13-201ENST00000243056 SMC1AQ14683 1233 aaKnown RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 ARGLU1Q9NWB6 273 aaPredicted RBP23.07■■□□□ 1.28
HOXC13-201ENST00000243056 IRS4O14654 1257 aaPredicted RBP23.06■■□□□ 1.28
HOXC13-201ENST00000243056 LIG1P18858 919 aa23.06■■□□□ 1.28
HOXC13-201ENST00000243056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.06■■□□□ 1.28
HOXC13-201ENST00000243056 CCDC34Q96HJ3 373 aa23.06■■□□□ 1.28
HOXC13-201ENST00000243056 PUS3Q9BZE2 481 aaKnown RBP23.06■■□□□ 1.28
HOXC13-201ENST00000243056 CCDC69A6NI79 296 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 ANAPC15P60006 121 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 HSP90AB3PQ58FF7 597 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 FOXR1Q6PIV2 292 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 EXOC4Q96A65 974 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 ESYT1Q9BSJ8 1104 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 PSD3Q9NYI0 1048 aa23.05■■□□□ 1.28
HOXC13-201ENST00000243056 NEMFO60524 1076 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 MCCP23508 829 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 LRRC24Q50LG9 513 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 RC3H1Q5TC82 1133 aaKnown RBP23.04■■□□□ 1.28
HOXC13-201ENST00000243056 SUFUQ9UMX1 484 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 EIF3CLB5ME19 914 aaKnown RBP23.04■■□□□ 1.28
HOXC13-201ENST00000243056 CCDC91Q7Z6B0 441 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 EGFL6Q8IUX8 553 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 EIF3CQ99613 913 aaKnown RBP23.04■■□□□ 1.28
HOXC13-201ENST00000243056 ADAM21Q9UKJ8 722 aa23.04■■□□□ 1.28
HOXC13-201ENST00000243056 DTNBO60941 627 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 MAP4K4O95819 1239 aaPredicted RBP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 G3BP1Q13283 466 aaKnown RBP eCLIP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 SUGP1Q8IWZ8 645 aaKnown RBP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 GREM2Q9H772 168 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 LY75O60449 1722 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 KIF2AO00139 706 aaPredicted RBP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 ZPR1O75312 459 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 PDE1AP54750 535 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 SATB1Q01826 763 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 SNW1Q13573 536 aaKnown RBP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 CCDC8Q9H0W5 538 aaPredicted RBP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 KCND1Q9NSA2 647 aa23.03■■□□□ 1.28
HOXC13-201ENST00000243056 TLR7Q9NYK1 1049 aaKnown RBP23.03■■□□□ 1.28
HOXC13-201ENST00000243056 SWT1Q5T5J6 900 aaKnown RBP23.02■■□□□ 1.28
HOXC13-201ENST00000243056 ATP8B1O43520 1251 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 RFC4P35249 363 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 TRAPPC3LQ5T215 181 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 DNAJC25Q9H1X3 360 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 NARFQ9UHQ1 456 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 ATP6V1DQ9Y5K8 247 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 RREB1Q92766 1687 aa23.02■■□□□ 1.28
HOXC13-201ENST00000243056 MCTP2Q6DN12 878 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 ANO2Q9NQ90 1003 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 TFCP2Q12800 502 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 ZNF827Q17R98 1081 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 GORABQ5T7V8 394 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 C3orf67Q6ZVT6 689 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 TTLL11Q8NHH1 800 aa23.01■■□□□ 1.27
HOXC13-201ENST00000243056 EAF2Q96CJ1 260 aaPredicted RBP23.01■■□□□ 1.27
HOXC13-201ENST00000243056 UTP14AQ9BVJ6 771 aaKnown RBP23.01■■□□□ 1.27
HOXC13-201ENST00000243056 ZNF165P49910 485 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 UBXN4Q92575 508 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 TNMDQ9H2S6 317 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 C4BP0C0L5 1744 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 RAB11FIP3O75154 756 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 NTSR2O95665 410 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 EN1Q05925 392 aaPredicted RBP23■■□□□ 1.27
HOXC13-201ENST00000243056 ERFEQ4G0M1 354 aa23■■□□□ 1.27
HOXC13-201ENST00000243056 LARP6Q9BRS8 491 aaKnown RBP23■■□□□ 1.27
HOXC13-201ENST00000243056 SALL3Q9BXA9 1300 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 IL17RAQ96F46 866 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 EPC1Q9H2F5 836 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 H3BQF6 201 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 CC2D1AQ6P1N0 951 aaPredicted RBP22.99■■□□□ 1.27
HOXC13-201ENST00000243056 TTC6Q86TZ1 520 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 AACSQ86V21 672 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 PPM1EQ8WY54 764 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 ZSCAN16Q9H4T2 348 aaPredicted RBP22.99■■□□□ 1.27
HOXC13-201ENST00000243056 COPRSQ9NQ92 184 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 SEC31BQ9NQW1 1179 aa22.99■■□□□ 1.27
HOXC13-201ENST00000243056 CICQ96RK0 1608 aaPredicted RBP22.98■■□□□ 1.27
HOXC13-201ENST00000243056 ANKRD65E5RJM6 399 aa22.98■■□□□ 1.27
HOXC13-201ENST00000243056 IVLP07476 585 aa22.98■■□□□ 1.27
HOXC13-201ENST00000243056 FAM212AQ96EL1 285 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms