RNA–Protein interactions for RNA: ENST00000238961.8

SLF2-201, Transcript of SMC5-SMC6 complex localization factor 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SLF2, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2-201ENST00000238961 RILPQ96NA2 401 aa11.52□□□□□ -0.57
SLF2-201ENST00000238961 NR1H4Q96RI1 486 aaPredicted RBP11.52□□□□□ -0.57
SLF2-201ENST00000238961 CTAGE1Q96RT6 745 aa11.52□□□□□ -0.57
SLF2-201ENST00000238961 NUCKS1Q9H1E3 243 aaKnown RBP11.52□□□□□ -0.57
SLF2-201ENST00000238961 I3L4J1 428 aa11.52□□□□□ -0.57
SLF2-201ENST00000238961 RAPGEF3O95398 923 aa11.52□□□□□ -0.57
SLF2-201ENST00000238961 UBASH3AP57075 661 aa11.52□□□□□ -0.57
SLF2-201ENST00000238961 POLD1P28340 1107 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 ITKQ08881 620 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 SPDL1Q96EA4 605 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 CTAGE9A4FU28 777 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 NAPAP54920 295 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 HP1BP3Q5SSJ5 553 aaPredicted RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 ZNF830Q96NB3 372 aaPredicted RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 FNDC3AQ9Y2H6 1198 aaKnown RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 GSTA1P08263 222 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 GSTA2P09210 222 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 CAPN2P17655 700 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 RNF168Q8IYW5 571 aaPredicted RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 NFKBIL1Q9UBC1 381 aaPredicted RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 BUB1BO60566 1050 aaPredicted RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 BSPRYQ5W0U4 402 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 ZSCAN30Q86W11 494 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 SDCCAG3Q96C92 435 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 IFIT1BQ5T764 474 aaKnown RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 KIF1BPQ96EK5 621 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
SLF2-201ENST00000238961 SPOPO43791 374 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 HAND2P61296 217 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 CEP128Q6ZU80 1094 aa11.51□□□□□ -0.57
SLF2-201ENST00000238961 CSPG5O95196 566 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 PYGLP06737 847 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 VPS41P49754 854 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 TFIP11Q9UBB9 837 aaKnown RBP11.5□□□□□ -0.57
SLF2-201ENST00000238961 ATP6V0A1Q93050 837 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 GLRX3O76003 335 aaKnown RBP11.5□□□□□ -0.57
SLF2-201ENST00000238961 TSNAXIP1Q2TAA8 658 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 JDP2Q8WYK2 163 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 IVNS1ABPQ9Y6Y0 642 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 NOP56O00567 594 aaKnown RBP11.5□□□□□ -0.57
SLF2-201ENST00000238961 PSMA7O14818 248 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 LARP6Q9BRS8 491 aaKnown RBP11.5□□□□□ -0.57
SLF2-201ENST00000238961 SCHIP1Q9P0W5 487 aaPredicted RBP11.5□□□□□ -0.57
SLF2-201ENST00000238961 NBPF6Q5VWK0 638 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 NBPF4Q96M43 638 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 FAM8A1Q9UBU6 413 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 GJA3Q9Y6H8 435 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 ARHGAP24Q8N264 748 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 AFAP1L1Q8TED9 768 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 EXOC6BQ9Y2D4 811 aa11.5□□□□□ -0.57
SLF2-201ENST00000238961 GOLGA6CA6NDK9 693 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 GOLGA6DP0CG33 693 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 XPAP23025 273 aaPredicted RBP11.49□□□□□ -0.57
SLF2-201ENST00000238961 GOLGA6AQ9NYA3 693 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 NUB1Q9Y5A7 615 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 SH2B1Q9NRF2 756 aaPredicted RBP11.49□□□□□ -0.57
SLF2-201ENST00000238961 VPS18Q9P253 973 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 FAM95CA0A1B0GW59 222 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 TTC30AQ86WT1 665 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 TEKT2Q9UIF3 430 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 NPR1P16066 1061 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 HPDP32754 393 aaPredicted RBP11.49□□□□□ -0.57
SLF2-201ENST00000238961 NOX5Q96PH1 765 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 CARD10Q9BWT7 1032 aa11.49□□□□□ -0.57
SLF2-201ENST00000238961 HHATQ5VTY9 493 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 DCLK2Q8N568 766 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 ORC3Q9UBD5 711 aaPredicted RBP11.48□□□□□ -0.57
SLF2-201ENST00000238961 FOXD4Q12950 439 aaPredicted RBP11.48□□□□□ -0.57
SLF2-201ENST00000238961 DBN1Q16643 649 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 CCDC42Q96M95 316 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 KRT23Q9C075 422 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 KIF9Q9HAQ2 790 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 LMCD1Q9NZU5 365 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 DNAJC8O75937 253 aaPredicted RBP11.48□□□□□ -0.57
SLF2-201ENST00000238961 APOEP02649 317 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 KRT83P78385 493 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 CCDC93Q567U6 631 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 LIN9Q5TKA1 542 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 ZNF365Q70YC5 407 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 KRT86O43790 486 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 SYKP43405 635 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 STRN3Q13033 797 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 CNGA4Q8IV77 575 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 GIMAP4Q9NUV9 329 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 BCAP29Q9UHQ4 241 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 WTAPQ15007 396 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 ZNF449Q6P9G9 518 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 CCDC26Q8TAB7 109 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 MED10Q9BTT4 135 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 VAV2P52735 878 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 TNNC1P63316 161 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 LGSNQ5TDP6 509 aa11.48□□□□□ -0.57
SLF2-201ENST00000238961 NBPF5PQ86XG9 351 aaPredicted RBP11.48□□□□□ -0.57
SLF2-201ENST00000238961 DDX19AQ9NUU7 478 aaKnown RBP11.48□□□□□ -0.57
SLF2-201ENST00000238961 PPP2R5AQ15172 486 aa11.47□□□□□ -0.57
SLF2-201ENST00000238961 ARFGAP2Q8N6H7 521 aa11.47□□□□□ -0.57
SLF2-201ENST00000238961 TMOD4Q9NZQ9 345 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms