RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 RIMBP3CA6NJZ7 1639 aa19.27■□□□□ 0.68
PTK7-202ENST00000230419 RIMBP3BA6NNM3 1639 aa19.27■□□□□ 0.68
PTK7-202ENST00000230419 RIMBP3Q9UFD9 1639 aa19.27■□□□□ 0.68
PTK7-202ENST00000230419 PREX1Q8TCU6 1659 aa19.27■□□□□ 0.67
PTK7-202ENST00000230419 PRKAB2O43741 272 aa19.27■□□□□ 0.67
PTK7-202ENST00000230419 EPS15P42566 896 aa19.27■□□□□ 0.67
PTK7-202ENST00000230419 GPIHBP1Q8IV16 184 aa19.27■□□□□ 0.67
PTK7-202ENST00000230419 CCDC194A0A1B0GVG4 234 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 RIMBP2O15034 1052 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 SCARF1Q14162 830 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 CEP131Q9UPN4 1083 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 DEPDC5O75140 1603 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 ARHGAP29Q52LW3 1261 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 TMEM131LA2VDJ0 1609 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 EIF5P55010 431 aaKnown RBP19.26■□□□□ 0.67
PTK7-202ENST00000230419 PICALMQ13492 652 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 TEX35Q5T0J7 233 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 ESR2Q92731 530 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 MAST3O60307 1309 aa19.26■□□□□ 0.67
PTK7-202ENST00000230419 DNA2P51530 1060 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 CEP135Q66GS9 1140 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 PDE8AO60658 829 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 MCM9Q9NXL9 1143 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 SAP30BPQ9UHR5 308 aaKnown RBP19.25■□□□□ 0.67
PTK7-202ENST00000230419 ADGRL3Q9HAR2 1447 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 AATFQ9NY61 560 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTK7-202ENST00000230419 TCEAL9Q9UHQ7 104 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 AK9Q5TCS8 1911 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 ERICH4A6NGS2 130 aa19.25■□□□□ 0.67
PTK7-202ENST00000230419 KAZALD1Q96I82 304 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 AK7Q96M32 723 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 CABP5Q9NP86 173 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 ANGEL1Q9UNK9 670 aaKnown RBP19.24■□□□□ 0.67
PTK7-202ENST00000230419 WDR17Q8IZU2 1322 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 LMTK3Q96Q04 1460 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 MAGEB6P1A0A0J9YX57 407 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 EPB41L2O43491 1005 aaKnown RBP19.24■□□□□ 0.67
PTK7-202ENST00000230419 CTSWP56202 376 aa19.24■□□□□ 0.67
PTK7-202ENST00000230419 SNW1Q13573 536 aaKnown RBP19.24■□□□□ 0.67
PTK7-202ENST00000230419 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
PTK7-202ENST00000230419 FAM160A1Q05DH4 1040 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 FAM47AQ5JRC9 791 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 KRT23Q9C075 422 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 RNF216Q9NWF9 866 aaPredicted RBP19.23■□□□□ 0.67
PTK7-202ENST00000230419 MAPK8IP1Q9UQF2 711 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 ARHGEF28Q8N1W1 1705 aaKnown RBP19.23■□□□□ 0.67
PTK7-202ENST00000230419 IDEP14735 1019 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 PDCL3Q9H2J4 239 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 NRBP1Q9UHY1 535 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 SSH2Q76I76 1423 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 EIF6P56537 245 aaKnown RBP19.23■□□□□ 0.67
PTK7-202ENST00000230419 STIM1Q13586 685 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 COL9A3Q14050 684 aaPredicted RBP19.23■□□□□ 0.67
PTK7-202ENST00000230419 CLSTN2Q9H4D0 955 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 DNAI1Q9UI46 699 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
PTK7-202ENST00000230419 CYP2D7A0A087X1C5 515 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 TNNT3P45378 269 aaPredicted RBP19.22■□□□□ 0.67
PTK7-202ENST00000230419 SPATA5Q8NB90 893 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 DEF6Q9H4E7 631 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 KAT14Q9H8E8 782 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 PDE6AP16499 860 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 PUM3Q15397 648 aaKnown RBP19.22■□□□□ 0.67
PTK7-202ENST00000230419 ZBTB38Q8NAP3 1195 aaPredicted RBP19.22■□□□□ 0.67
PTK7-202ENST00000230419 CCDC43Q96MW1 224 aaKnown RBP19.22■□□□□ 0.67
PTK7-202ENST00000230419 CTDP1Q9Y5B0 961 aaPredicted RBP19.22■□□□□ 0.67
PTK7-202ENST00000230419 ERCC3P19447 782 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 GPS2Q13227 327 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 CCDC87Q9NVE4 849 aa19.22■□□□□ 0.67
PTK7-202ENST00000230419 PDIA6Q15084 440 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 CLIC6Q96NY7 704 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 PPP1R9BQ96SB3 815 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 V9GY48 417 aaPredicted RBP19.21■□□□□ 0.67
PTK7-202ENST00000230419 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 PDIA3P30101 505 aaKnown RBP19.21■□□□□ 0.67
PTK7-202ENST00000230419 CCDC96Q2M329 555 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 ANO1Q5XXA6 986 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 GNG11P61952 73 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 ZNF174Q15697 407 aa19.21■□□□□ 0.67
PTK7-202ENST00000230419 HS1BP3Q53T59 392 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 KRT40Q6A162 431 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 ZNHIT6Q9NWK9 470 aaKnown RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 DYNC1I1O14576 645 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 UBA7P41226 1012 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 TOB2Q14106 344 aaPredicted RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 DIS3L2Q8IYB7 885 aaKnown RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 HEG1Q9ULI3 1381 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 COBLO75128 1261 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 KIF4BQ2VIQ3 1234 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 NOM1Q5C9Z4 860 aaKnown RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 GIGYF2Q6Y7W6 1299 aaKnown RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 HEATR3Q7Z4Q2 680 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 ZNF622Q969S3 477 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTK7-202ENST00000230419 EEF2KMTQ96G04 330 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 SEC63Q9UGP8 760 aaKnown RBP19.2■□□□□ 0.66
PTK7-202ENST00000230419 CCP110O43303 1012 aa19.2■□□□□ 0.66
PTK7-202ENST00000230419 KCNQ2O43526 872 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms