RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 TMX1Q9H3N1 280 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 GLI3P10071 1580 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 A0A1W2PQ27 194 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 A0A1W2PQ64 194 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 A0A1W2PQD8 194 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 CABP4P57796 275 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 NLRP12P59046 1061 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 EXOC4Q96A65 974 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 SIL1Q9H173 461 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 ATG3Q9NT62 314 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 PSD3Q9NYI0 1048 aa20.44■□□□□ 0.86
CDKN1B-201ENST00000228872 BIN1O00499 593 aa20.43■□□□□ 0.86
CDKN1B-201ENST00000228872 PROSER3Q2NL68 480 aa20.43■□□□□ 0.86
CDKN1B-201ENST00000228872 ARFGAP3Q9NP61 516 aa20.43■□□□□ 0.86
CDKN1B-201ENST00000228872 GUCY1B3Q02153 619 aa20.43■□□□□ 0.86
CDKN1B-201ENST00000228872 EDC3Q96F86 508 aaKnown RBP20.43■□□□□ 0.86
CDKN1B-201ENST00000228872 FUT8Q9BYC5 575 aa20.43■□□□□ 0.86
CDKN1B-201ENST00000228872 LMOD1P29536 600 aaPredicted RBP20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 UTP14AQ9BVJ6 771 aaKnown RBP20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 U3KPZ7 1027 aaPredicted RBP20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 SLIT2O94813 1529 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 VWA3AA6NCI4 1184 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 CYP21A2P08686 494 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 NOP2P46087 812 aaKnown RBP20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 GYS2P54840 703 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 IRX3P78415 501 aaPredicted RBP20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 FCHSD1Q86WN1 690 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 SEC62Q99442 399 aaKnown RBP20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 MPHOSPH8Q99549 860 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 RTEL1Q9NZ71 1219 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 LRP6O75581 1613 aa20.42■□□□□ 0.86
CDKN1B-201ENST00000228872 SLC3A2P08195 630 aaKnown RBP20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 CASQ1P31415 396 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 SLC39A6Q13433 755 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 RSRC2Q7L4I2 434 aaKnown RBP20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 SRLQ86TD4 932 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 CERS3Q8IU89 383 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 ADAM21Q9UKJ8 722 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 ADAMTS2O95450 1211 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 ATP1A3P13637 1013 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 LMAN1P49257 510 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 PARD6BQ9BYG5 372 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 MAP3K2Q9Y2U5 619 aa20.41■□□□□ 0.86
CDKN1B-201ENST00000228872 ZSCAN12O43309 604 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 MAP3K9P80192 1104 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 PPP2R3AQ06190 1150 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 GNL2Q13823 731 aaKnown RBP20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 IQUBQ8NA54 791 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 HSD3B7Q9H2F3 369 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 HDAC5Q9UQL6 1122 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 SALL1Q9NSC2 1324 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 APOBRQ0VD83 1088 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 CCDC129Q6ZRS4 1044 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 STOX1Q6ZVD7 989 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 DPF2Q92785 391 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 SUCLG2Q96I99 432 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 ITGB4P16144 1822 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 H3BQF6 201 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 IKBKBO14920 756 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 CCT2P78371 535 aaKnown RBP20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 CWF19L2Q2TBE0 894 aaKnown RBP20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 TTC5Q8N0Z6 440 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 LINC00301Q8NCQ3 95 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 RRP15Q9Y3B9 282 aaKnown RBP20.4■□□□□ 0.86
CDKN1B-201ENST00000228872 DHX16O60231 1041 aaKnown RBP20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 FAM177A1Q8N128 213 aaPredicted RBP20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 KAZALD1Q96I82 304 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 PPP2R2CQ9Y2T4 447 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 MRFAP1Q9Y605 127 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 PPFIA3O75145 1194 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 GOLGA8FQ08AF8 430 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 GOLGA8DPQ0D2H9 430 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 RABGGTAQ92696 567 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 WDR24Q96S15 920 aa20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 THRAP3Q9Y2W1 955 aaKnown RBP20.39■□□□□ 0.85
CDKN1B-201ENST00000228872 ACTN2P35609 894 aa20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 UBASH3AP57075 661 aa20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 BICC1Q9H694 974 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 NCOA5Q9HCD5 579 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 STK38Q15208 465 aa20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 SF3A1Q15459 793 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 DHX32Q7L7V1 743 aaKnown RBP20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 ZNF496Q96IT1 587 aaPredicted RBP20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 CDCA7Q9BWT1 371 aaPredicted RBP20.38■□□□□ 0.85
CDKN1B-201ENST00000228872 SPATA31A1Q5TZJ5 1347 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 ZNF609O15014 1411 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 TNS2Q63HR2 1409 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 NUTM2BA6NNL0 878 aaPredicted RBP20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 NUTM2EB1AL46 878 aaPredicted RBP20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 CBFA2T2O43439 604 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 GNG11P61952 73 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 LONRF2Q1L5Z9 754 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 TMEM139Q8IV31 216 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 NUTM2AQ8IVF1 878 aaPredicted RBP20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 VSTM4Q8IW00 320 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 CLIC4Q9Y696 253 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 KCPQ6ZWJ8 1503 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 KSR2Q6VAB6 950 aa20.37■□□□□ 0.85
CDKN1B-201ENST00000228872 ARHGAP6O43182 974 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms