RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 H7C1D1 291 aa18.25■□□□□ 0.51
RPA3-201ENST00000223129 OGFOD1Q8N543 542 aa18.25■□□□□ 0.51
RPA3-201ENST00000223129 GPBP1L1Q9HC44 474 aaPredicted RBP18.25■□□□□ 0.51
RPA3-201ENST00000223129 PCDHAC2Q9Y5I4 1007 aa18.25■□□□□ 0.51
RPA3-201ENST00000223129 TBC1D10BQ4KMP7 808 aaPredicted RBP18.25■□□□□ 0.51
RPA3-201ENST00000223129 OSBPL3Q9H4L5 887 aa18.25■□□□□ 0.51
RPA3-201ENST00000223129 RAI14Q9P0K7 980 aa18.25■□□□□ 0.51
RPA3-201ENST00000223129 SUGT1Q9Y2Z0 365 aa18.25■□□□□ 0.51
RPA3-201ENST00000223129 VEGFAP15692 232 aaPredicted RBP18.24■□□□□ 0.51
RPA3-201ENST00000223129 EPHX2P34913 555 aa18.24■□□□□ 0.51
RPA3-201ENST00000223129 ZNF280AP59817 542 aaPredicted RBP18.24■□□□□ 0.51
RPA3-201ENST00000223129 DIXDC1Q155Q3 683 aa18.24■□□□□ 0.51
RPA3-201ENST00000223129 SPTY2D1Q68D10 685 aaPredicted RBP18.24■□□□□ 0.51
RPA3-201ENST00000223129 ZNF784Q8NCA9 323 aaPredicted RBP18.24■□□□□ 0.51
RPA3-201ENST00000223129 HDAC9Q9UKV0 1011 aa18.24■□□□□ 0.51
RPA3-201ENST00000223129 IQCA1LA6NCM1 817 aa18.23■□□□□ 0.51
RPA3-201ENST00000223129 IDH1O75874 414 aaKnown RBP18.23■□□□□ 0.51
RPA3-201ENST00000223129 MECOMQ03112 1051 aa18.23■□□□□ 0.51
RPA3-201ENST00000223129 TRPM4Q8TD43 1214 aa18.23■□□□□ 0.51
RPA3-201ENST00000223129 ZNF384Q8TF68 577 aa18.23■□□□□ 0.51
RPA3-201ENST00000223129 TAF1DQ9H5J8 278 aaPredicted RBP18.23■□□□□ 0.51
RPA3-201ENST00000223129 MYOZ2Q9NPC6 264 aa18.23■□□□□ 0.51
RPA3-201ENST00000223129 SCN4AP35499 1836 aa18.23■□□□□ 0.51
RPA3-201ENST00000223129 RBM5P52756 815 aaKnown RBP eCLIP18.23■□□□□ 0.51
RPA3-201ENST00000223129 TTF1Q15361 905 aaPredicted RBP18.23■□□□□ 0.51
RPA3-201ENST00000223129 DZIP1Q86YF9 867 aaKnown RBP18.23■□□□□ 0.51
RPA3-201ENST00000223129 NSUN4Q96CB9 384 aaKnown RBP18.23■□□□□ 0.51
RPA3-201ENST00000223129 ADARB2Q9NS39 739 aaKnown RBP18.23■□□□□ 0.51
RPA3-201ENST00000223129 ADAMTSL1Q8N6G6 1762 aa18.22■□□□□ 0.51
RPA3-201ENST00000223129 CRKP46108 304 aa18.22■□□□□ 0.51
RPA3-201ENST00000223129 RGS3P49796 1198 aa18.22■□□□□ 0.51
RPA3-201ENST00000223129 HIRAP54198 1017 aaPredicted RBP18.22■□□□□ 0.51
RPA3-201ENST00000223129 AOX1Q06278 1338 aa18.22■□□□□ 0.51
RPA3-201ENST00000223129 CFAP100Q494V2 611 aa18.22■□□□□ 0.51
RPA3-201ENST00000223129 CHGBP05060 677 aa18.21■□□□□ 0.51
RPA3-201ENST00000223129 KIF4BQ2VIQ3 1234 aa18.21■□□□□ 0.51
RPA3-201ENST00000223129 EAPPQ56P03 285 aaPredicted RBP18.21■□□□□ 0.51
RPA3-201ENST00000223129 SERPINA10Q9UK55 444 aa18.21■□□□□ 0.51
RPA3-201ENST00000223129 POTEIP0CG38 1075 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 POTEJP0CG39 1038 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 NBPF9Q3BBW0 867 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 SLFNL1Q499Z3 407 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 TEKT1Q969V4 418 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 PRMT6Q96LA8 375 aaPredicted RBP18.2■□□□□ 0.5
RPA3-201ENST00000223129 DOCK2Q92608 1830 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 MAST3O60307 1309 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 MAP3K12Q12852 859 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 DLGAP5Q15398 846 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 MAGEB6Q8N7X4 407 aa18.2■□□□□ 0.5
RPA3-201ENST00000223129 MYH2Q9UKX2 1941 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 WNT10BO00744 389 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 HDLBPQ00341 1268 aaKnown RBP18.19■□□□□ 0.5
RPA3-201ENST00000223129 TTC22Q5TAA0 569 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 SLC9C2Q5TAH2 1124 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 NAA16Q6N069 864 aaPredicted RBP18.19■□□□□ 0.5
RPA3-201ENST00000223129 HHIPL2Q6UWX4 724 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 KBTBD3Q8NAB2 608 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 RILPL2Q969X0 211 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 MRIQ9BWK5 157 aa18.19■□□□□ 0.5
RPA3-201ENST00000223129 ASTN2O75129 1339 aaPredicted RBP18.19■□□□□ 0.5
RPA3-201ENST00000223129 GSPT1P15170 499 aaKnown RBP18.18■□□□□ 0.5
RPA3-201ENST00000223129 MMP14P50281 582 aa18.18■□□□□ 0.5
RPA3-201ENST00000223129 USP50Q70EL3 339 aaPredicted RBP18.18■□□□□ 0.5
RPA3-201ENST00000223129 ADGRA1Q86SQ6 560 aa18.18■□□□□ 0.5
RPA3-201ENST00000223129 ZBED3Q96IU2 234 aaPredicted RBP18.18■□□□□ 0.5
RPA3-201ENST00000223129 DAGLAQ9Y4D2 1042 aa18.18■□□□□ 0.5
RPA3-201ENST00000223129 KIF3CO14782 793 aa18.18■□□□□ 0.5
RPA3-201ENST00000223129 CYP7A1P22680 504 aa18.18■□□□□ 0.5
RPA3-201ENST00000223129 MTMR14Q8NCE2 650 aa18.18■□□□□ 0.5
RPA3-201ENST00000223129 SPDYE2BA6NHP3 402 aa18.17■□□□□ 0.5
RPA3-201ENST00000223129 SPDYE6P0CI01 402 aa18.17■□□□□ 0.5
RPA3-201ENST00000223129 PDE6AP16499 860 aa18.17■□□□□ 0.5
RPA3-201ENST00000223129 APOBEC3HQ6NTF7 200 aaKnown RBP18.17■□□□□ 0.5
RPA3-201ENST00000223129 PNMA8AQ86V59 439 aaPredicted RBP18.17■□□□□ 0.5
RPA3-201ENST00000223129 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
RPA3-201ENST00000223129 ZDHHC15Q96MV8 337 aa18.17■□□□□ 0.5
RPA3-201ENST00000223129 FSD1Q9BTV5 496 aa18.17■□□□□ 0.5
RPA3-201ENST00000223129 GSTO1P78417 241 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 SLF2Q8IX21 1173 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 TDRD3Q9H7E2 651 aaKnown RBP18.16■□□□□ 0.5
RPA3-201ENST00000223129 CLEC11AQ9Y240 323 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 MROH7-TTC4A0A0A0MT08 1334 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 ZNF532Q9HCE3 1301 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 LDHCP07864 332 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 ADD2P35612 726 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 CNTROBQ8N137 903 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 FAM163AQ96GL9 167 aaPredicted RBP18.16■□□□□ 0.5
RPA3-201ENST00000223129 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.16■□□□□ 0.5
RPA3-201ENST00000223129 SCAF8Q9UPN6 1271 aaKnown RBP18.16■□□□□ 0.5
RPA3-201ENST00000223129 GAKO14976 1311 aa18.16■□□□□ 0.5
RPA3-201ENST00000223129 TCRBV5S4A2TA0A5A2 114 aa18.15■□□□□ 0.5
RPA3-201ENST00000223129 CLRN2A0PK11 232 aa18.15■□□□□ 0.5
RPA3-201ENST00000223129 MAST2Q6P0Q8 1798 aa18.15■□□□□ 0.5
RPA3-201ENST00000223129 SDSP20132 328 aa18.15■□□□□ 0.5
RPA3-201ENST00000223129 BTDP43251 543 aa18.15■□□□□ 0.5
RPA3-201ENST00000223129 MIGA1Q8NAN2 632 aa18.15■□□□□ 0.5
RPA3-201ENST00000223129 AATFQ9NY61 560 aaKnown RBP eCLIP18.15■□□□□ 0.5
RPA3-201ENST00000223129 MYH7P12883 1935 aa18.14■□□□□ 0.5
RPA3-201ENST00000223129 GPR75-ASB3A0A0A6YYF3 556 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms