RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 MPHOSPH8Q99549 860 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 PUS7LQ9H0K6 701 aaKnown RBP26.01■■□□□ 1.75
CCDC9-201ENST00000221922 KCNF1Q9H3M0 494 aa26.01■■□□□ 1.75
CCDC9-201ENST00000221922 GOLGA6L6A8MZA4 724 aa26■■□□□ 1.75
CCDC9-201ENST00000221922 GPAA1O43292 621 aa26■■□□□ 1.75
CCDC9-201ENST00000221922 FGAP02671 866 aa26■■□□□ 1.75
CCDC9-201ENST00000221922 PDIA3P30101 505 aaKnown RBP26■■□□□ 1.75
CCDC9-201ENST00000221922 CTDNEP1O95476 244 aa26■■□□□ 1.75
CCDC9-201ENST00000221922 SEC31BQ9NQW1 1179 aa26■■□□□ 1.75
CCDC9-201ENST00000221922 SALL1Q9NSC2 1324 aa25.99■■□□□ 1.75
CCDC9-201ENST00000221922 C17orf53Q8N3J3 647 aaPredicted RBP25.99■■□□□ 1.75
CCDC9-201ENST00000221922 DOCK2Q92608 1830 aa25.99■■□□□ 1.75
CCDC9-201ENST00000221922 NHSQ6T4R5 1651 aa25.99■■□□□ 1.75
CCDC9-201ENST00000221922 WDR19Q8NEZ3 1342 aa25.99■■□□□ 1.75
CCDC9-201ENST00000221922 UBE3CQ15386 1083 aa25.99■■□□□ 1.75
CCDC9-201ENST00000221922 CKAP2LQ8IYA6 745 aa25.99■■□□□ 1.75
CCDC9-201ENST00000221922 MYO5AQ9Y4I1 1855 aaKnown RBP25.98■■□□□ 1.75
CCDC9-201ENST00000221922 BTAF1O14981 1849 aa25.98■■□□□ 1.75
CCDC9-201ENST00000221922 IGHMBP2P38935 993 aaKnown RBP25.98■■□□□ 1.75
CCDC9-201ENST00000221922 CCT2P78371 535 aaKnown RBP25.98■■□□□ 1.75
CCDC9-201ENST00000221922 HELBQ8NG08 1087 aaPredicted RBP25.98■■□□□ 1.75
CCDC9-201ENST00000221922 NCOA7Q8NI08 942 aa25.98■■□□□ 1.75
CCDC9-201ENST00000221922 PIH1D3Q9NQM4 214 aaKnown RBP25.98■■□□□ 1.75
CCDC9-201ENST00000221922 NAP1L2Q9ULW6 460 aaPredicted RBP25.98■■□□□ 1.75
CCDC9-201ENST00000221922 SPATA31A6Q5VVP1 1343 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 GTF2F1P35269 517 aaKnown RBP eCLIP25.97■■□□□ 1.754e-7■■■■■ 36.1
CCDC9-201ENST00000221922 ANO6Q4KMQ2 910 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 ATL3Q6DD88 541 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 LUZP1Q86V48 1076 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 CBX8Q9HC52 389 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 ZNF213O14771 459 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 NR1I2O75469 434 aa25.97■■□□□ 1.75
CCDC9-201ENST00000221922 RALYLQ86SE5 291 aaKnown RBP25.97■■□□□ 1.75
CCDC9-201ENST00000221922 MB21D2Q8IYB1 491 aaPredicted RBP25.97■■□□□ 1.75
CCDC9-201ENST00000221922 HAND2P61296 217 aa25.96■■□□□ 1.75
CCDC9-201ENST00000221922 SLC9C2Q5TAH2 1124 aa25.96■■□□□ 1.75
CCDC9-201ENST00000221922 CHST3Q7LGC8 479 aa25.96■■□□□ 1.75
CCDC9-201ENST00000221922 CASZ1Q86V15 1759 aa25.95■■□□□ 1.75
CCDC9-201ENST00000221922 PRC1O43663 620 aa25.95■■□□□ 1.74
CCDC9-201ENST00000221922 DHX16O60231 1041 aaKnown RBP25.95■■□□□ 1.74
CCDC9-201ENST00000221922 SPC24Q8NBT2 197 aa25.95■■□□□ 1.74
CCDC9-201ENST00000221922 TDRD7Q8NHU6 1098 aaKnown RBP25.95■■□□□ 1.74
CCDC9-201ENST00000221922 BICD2Q8TD16 824 aa25.95■■□□□ 1.74
CCDC9-201ENST00000221922 NCOA5Q9HCD5 579 aaKnown RBP25.95■■□□□ 1.74
CCDC9-201ENST00000221922 PYCARDQ9ULZ3 195 aa25.95■■□□□ 1.74
CCDC9-201ENST00000221922 ADD1P35611 737 aaKnown RBP25.94■■□□□ 1.74
CCDC9-201ENST00000221922 RC3H1Q5TC82 1133 aaKnown RBP25.94■■□□□ 1.74
CCDC9-201ENST00000221922 SPATA5Q8NB90 893 aa25.94■■□□□ 1.74
CCDC9-201ENST00000221922 IDH1O75874 414 aaKnown RBP25.94■■□□□ 1.74
CCDC9-201ENST00000221922 CAVIN2O95810 425 aa25.94■■□□□ 1.74
CCDC9-201ENST00000221922 A0A1B0GUL6 1792 aa25.93■■□□□ 1.74
CCDC9-201ENST00000221922 CARMIL3Q8ND23 1372 aa25.93■■□□□ 1.74
CCDC9-201ENST00000221922 PDE6AP16499 860 aa25.93■■□□□ 1.74
CCDC9-201ENST00000221922 ZNF396Q96N95 335 aaPredicted RBP25.93■■□□□ 1.74
CCDC9-201ENST00000221922 CDC5LQ99459 802 aaKnown RBP25.93■■□□□ 1.74
CCDC9-201ENST00000221922 USP21Q9UK80 565 aa25.93■■□□□ 1.74
CCDC9-201ENST00000221922 TCRBV5S4A2TA0A5A2 114 aa25.92■■□□□ 1.74
CCDC9-201ENST00000221922 TRDNQ13061 729 aa25.92■■□□□ 1.74
CCDC9-201ENST00000221922 ZNF532Q9HCE3 1301 aa25.92■■□□□ 1.74
CCDC9-201ENST00000221922 RASGRF1Q13972 1273 aa25.92■■□□□ 1.74
CCDC9-201ENST00000221922 RCOR1Q9UKL0 485 aa25.92■■□□□ 1.74
CCDC9-201ENST00000221922 SF3B3Q15393 1217 aaKnown RBP25.91■■□□□ 1.74
CCDC9-201ENST00000221922 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.91■■□□□ 1.74
CCDC9-201ENST00000221922 PLA2G4DQ86XP0 818 aa25.91■■□□□ 1.74
CCDC9-201ENST00000221922 COL24A1Q17RW2 1714 aa25.91■■□□□ 1.74
CCDC9-201ENST00000221922 COL4A1P02462 1669 aa25.9■■□□□ 1.74
CCDC9-201ENST00000221922 KLF18A0A0U1RQI7 1052 aa25.9■■□□□ 1.74
CCDC9-201ENST00000221922 ERFEQ4G0M1 354 aa25.9■■□□□ 1.74
CCDC9-201ENST00000221922 WWC3Q9ULE0 1092 aa25.9■■□□□ 1.74
CCDC9-201ENST00000221922 ZNF165P49910 485 aa25.89■■□□□ 1.74
CCDC9-201ENST00000221922 ZNF75DP51815 510 aa25.89■■□□□ 1.74
CCDC9-201ENST00000221922 CHRNDQ07001 517 aa25.89■■□□□ 1.74
CCDC9-201ENST00000221922 PTF1AQ7RTS3 328 aa25.89■■□□□ 1.74
CCDC9-201ENST00000221922 GOLGA8BA8MQT2 603 aa25.89■■□□□ 1.73
CCDC9-201ENST00000221922 RPS6KA4O75676 772 aa25.89■■□□□ 1.73
CCDC9-201ENST00000221922 PTGS1P23219 599 aa25.89■■□□□ 1.73
CCDC9-201ENST00000221922 ANTXR2P58335 489 aa25.89■■□□□ 1.73
CCDC9-201ENST00000221922 SNAP23O00161 211 aa25.88■■□□□ 1.73
CCDC9-201ENST00000221922 MAP3K12Q12852 859 aa25.88■■□□□ 1.73
CCDC9-201ENST00000221922 SLC10A5Q5PT55 438 aa25.88■■□□□ 1.73
CCDC9-201ENST00000221922 NARFQ9UHQ1 456 aa25.88■■□□□ 1.73
CCDC9-201ENST00000221922 ZMYM6O95789 1325 aa25.88■■□□□ 1.73
CCDC9-201ENST00000221922 LY75O60449 1722 aa25.88■■□□□ 1.73
CCDC9-201ENST00000221922 FOSBP53539 338 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 KCNQ4P56696 695 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 BCL2L12Q9HB09 334 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 GPHNQ9NQX3 736 aaPredicted RBP25.87■■□□□ 1.73
CCDC9-201ENST00000221922 CTAGE5O15320 804 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 APPP05067 770 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 ALX1Q15699 326 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 RGS22Q8NE09 1264 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 AIDAQ96BJ3 306 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 DNAJC25Q9H1X3 360 aa25.87■■□□□ 1.73
CCDC9-201ENST00000221922 FDPSP14324 419 aaKnown RBP25.86■■□□□ 1.73
CCDC9-201ENST00000221922 STRBPQ96SI9 672 aaKnown RBP25.86■■□□□ 1.73
CCDC9-201ENST00000221922 CPLX1O14810 134 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 ANKRD18AQ8IVF6 992 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 TRIM5Q9C035 493 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 HPS5Q9UPZ3 1129 aa25.86■■□□□ 1.73
CCDC9-201ENST00000221922 C4AP0C0L4 1744 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms