RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 CYP2E1P05181 493 aaPredicted RBP28.8■■■□□ 2.2
HOMER3-201ENST00000221222 OGFOD1Q8N543 542 aa28.8■■■□□ 2.2
HOMER3-201ENST00000221222 CREBZFQ9NS37 354 aa28.8■■■□□ 2.2
HOMER3-201ENST00000221222 ADARB2Q9NS39 739 aaKnown RBP28.8■■■□□ 2.2
HOMER3-201ENST00000221222 DOCK2Q92608 1830 aa28.8■■■□□ 2.2
HOMER3-201ENST00000221222 HDAC9Q9UKV0 1011 aa28.79■■■□□ 2.2
HOMER3-201ENST00000221222 TTF2Q9UNY4 1162 aaKnown RBP28.79■■■□□ 2.2
HOMER3-201ENST00000221222 MYO5AQ9Y4I1 1855 aaKnown RBP28.79■■■□□ 2.2
HOMER3-201ENST00000221222 LDHBP07195 334 aaKnown RBP28.78■■■□□ 2.2
HOMER3-201ENST00000221222 PRDX5P30044 214 aa28.78■■■□□ 2.2
HOMER3-201ENST00000221222 SPTY2D1Q68D10 685 aaPredicted RBP28.78■■■□□ 2.2
HOMER3-201ENST00000221222 HAUS7Q99871 368 aa28.78■■■□□ 2.2
HOMER3-201ENST00000221222 BOLA2Q9H3K6 86 aa28.78■■■□□ 2.2
HOMER3-201ENST00000221222 ADAMTSL1Q8N6G6 1762 aa28.78■■■□□ 2.2
HOMER3-201ENST00000221222 MAST3O60307 1309 aa28.78■■■□□ 2.2
HOMER3-201ENST00000221222 PASKQ96RG2 1323 aa28.78■■■□□ 2.2
HOMER3-201ENST00000221222 F8W031 263 aaPredicted RBP28.77■■■□□ 2.2
HOMER3-201ENST00000221222 ERC2O15083 957 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 PDE1AP54750 535 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 TSHZ3Q63HK5 1081 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 MAP1SQ66K74 1059 aaPredicted RBP28.77■■■□□ 2.2
HOMER3-201ENST00000221222 PI4K2BQ8TCG2 481 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 ABCF2Q9UG63 623 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 PCNTO95613 3336 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 MAST2Q6P0Q8 1798 aa28.77■■■□□ 2.2
HOMER3-201ENST00000221222 IGSF3O75054 1194 aa28.76■■■□□ 2.2
HOMER3-201ENST00000221222 HDLBPQ00341 1268 aaKnown RBP28.76■■■□□ 2.2
HOMER3-201ENST00000221222 TBC1D9Q6ZT07 1266 aa28.76■■■□□ 2.2
HOMER3-201ENST00000221222 MRIQ9BWK5 157 aa28.76■■■□□ 2.2
HOMER3-201ENST00000221222 MYOZ2Q9NPC6 264 aa28.76■■■□□ 2.2
HOMER3-201ENST00000221222 NDUFB9Q9Y6M9 179 aa28.76■■■□□ 2.2
HOMER3-201ENST00000221222 AOX1Q06278 1338 aa28.76■■■□□ 2.19
HOMER3-201ENST00000221222 GLRX3O76003 335 aaKnown RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 ITGBL1O95965 494 aaPredicted RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 HSPA1AP0DMV8 641 aaKnown RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 HSPA1BP0DMV9 641 aaKnown RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 USP50Q70EL3 339 aaPredicted RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 ERICH6Q7L0X2 663 aa28.75■■■□□ 2.19
HOMER3-201ENST00000221222 PNMA8AQ86V59 439 aaPredicted RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 OSBPL3Q9H4L5 887 aa28.75■■■□□ 2.19
HOMER3-201ENST00000221222 SERPINA10Q9UK55 444 aa28.75■■■□□ 2.19
HOMER3-201ENST00000221222 COL13A1Q5TAT6 717 aaPredicted RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 SAMD7Q7Z3H4 446 aa28.75■■■□□ 2.19
HOMER3-201ENST00000221222 PLEKHM2Q8IWE5 1019 aa28.75■■■□□ 2.19
HOMER3-201ENST00000221222 DNAJC2Q99543 621 aaKnown RBP28.75■■■□□ 2.19
HOMER3-201ENST00000221222 EGFRP00533 1210 aa28.74■■■□□ 2.19
HOMER3-201ENST00000221222 PDE4AP27815 886 aa28.74■■■□□ 2.19
HOMER3-201ENST00000221222 TTF1Q15361 905 aaPredicted RBP28.74■■■□□ 2.19
HOMER3-201ENST00000221222 MTMR14Q8NCE2 650 aa28.74■■■□□ 2.19
HOMER3-201ENST00000221222 TRPM4Q8TD43 1214 aa28.74■■■□□ 2.19
HOMER3-201ENST00000221222 ANTXR1Q9H6X2 564 aa28.74■■■□□ 2.19
HOMER3-201ENST00000221222 PIH1D3Q9NQM4 214 aaKnown RBP28.74■■■□□ 2.19
HOMER3-201ENST00000221222 PAG1Q9NWQ8 432 aa28.74■■■□□ 2.19
HOMER3-201ENST00000221222 MYH2Q9UKX2 1941 aa28.73■■■□□ 2.19
HOMER3-201ENST00000221222 KIF4BQ2VIQ3 1234 aa28.73■■■□□ 2.19
HOMER3-201ENST00000221222 TBC1D10BQ4KMP7 808 aaPredicted RBP28.73■■■□□ 2.19
HOMER3-201ENST00000221222 CNTROBQ8N137 903 aa28.73■■■□□ 2.19
HOMER3-201ENST00000221222 LRP2BPQ9P2M1 347 aa28.73■■■□□ 2.19
HOMER3-201ENST00000221222 ECM29Q5VYK3 1845 aa28.72■■■□□ 2.19
HOMER3-201ENST00000221222 GOLIM4O00461 696 aa28.72■■■□□ 2.19
HOMER3-201ENST00000221222 HIRAP54198 1017 aaPredicted RBP28.72■■■□□ 2.19
HOMER3-201ENST00000221222 ZBED3Q96IU2 234 aaPredicted RBP28.72■■■□□ 2.19
HOMER3-201ENST00000221222 CRKP46108 304 aa28.71■■■□□ 2.19
HOMER3-201ENST00000221222 HHIPL2Q6UWX4 724 aa28.71■■■□□ 2.19
HOMER3-201ENST00000221222 DZIP1Q86YF9 867 aaKnown RBP28.71■■■□□ 2.19
HOMER3-201ENST00000221222 RAI14Q9P0K7 980 aa28.71■■■□□ 2.19
HOMER3-201ENST00000221222 TMEM88BA6NKF7 163 aa28.7■■■□□ 2.18
HOMER3-201ENST00000221222 MECOMQ03112 1051 aa28.7■■■□□ 2.18
HOMER3-201ENST00000221222 CFAP100Q494V2 611 aa28.7■■■□□ 2.18
HOMER3-201ENST00000221222 RBM26Q5T8P6 1007 aaKnown RBP28.7■■■□□ 2.18
HOMER3-201ENST00000221222 ZNF384Q8TF68 577 aa28.7■■■□□ 2.18
HOMER3-201ENST00000221222 TEKT1Q969V4 418 aa28.7■■■□□ 2.18
HOMER3-201ENST00000221222 NSUN4Q96CB9 384 aaKnown RBP28.7■■■□□ 2.18
HOMER3-201ENST00000221222 EDC3Q96F86 508 aaKnown RBP28.7■■■□□ 2.18
HOMER3-201ENST00000221222 MYH7P12883 1935 aa28.69■■■□□ 2.18
HOMER3-201ENST00000221222 DLGAP5Q15398 846 aa28.69■■■□□ 2.18
HOMER3-201ENST00000221222 CNTNAP1P78357 1384 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 SPDYE2BA6NHP3 402 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 WNT10BO00744 389 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 SPDYE6P0CI01 402 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 DIXDC1Q155Q3 683 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 TMED8Q6PL24 325 aaPredicted RBP28.68■■■□□ 2.18
HOMER3-201ENST00000221222 SLF2Q8IX21 1173 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 FAM163AQ96GL9 167 aaPredicted RBP28.68■■■□□ 2.18
HOMER3-201ENST00000221222 ZDHHC15Q96MV8 337 aa28.68■■■□□ 2.18
HOMER3-201ENST00000221222 IDH1O75874 414 aaKnown RBP28.67■■■□□ 2.18
HOMER3-201ENST00000221222 GSTO1P78417 241 aa28.67■■■□□ 2.18
HOMER3-201ENST00000221222 MAP3K12Q12852 859 aa28.67■■■□□ 2.18
HOMER3-201ENST00000221222 ZC3H15Q8WU90 426 aaKnown RBP28.67■■■□□ 2.18
HOMER3-201ENST00000221222 PGAP2Q9UHJ9 254 aa28.67■■■□□ 2.18
HOMER3-201ENST00000221222 GAKO14976 1311 aa28.67■■■□□ 2.18
HOMER3-201ENST00000221222 RBM5P52756 815 aaKnown RBP eCLIP28.66■■■□□ 2.18
HOMER3-201ENST00000221222 NBPF9Q3BBW0 867 aa28.66■■■□□ 2.18
HOMER3-201ENST00000221222 DAGLAQ9Y4D2 1042 aa28.66■■■□□ 2.18
HOMER3-201ENST00000221222 PCDHAC2Q9Y5I4 1007 aa28.66■■■□□ 2.18
HOMER3-201ENST00000221222 FMR1Q06787 632 aaKnown RBP eCLIP28.65■■■□□ 2.18
HOMER3-201ENST00000221222 PRMT6Q96LA8 375 aaPredicted RBP28.65■■■□□ 2.18
HOMER3-201ENST00000221222 NAA16Q6N069 864 aaPredicted RBP28.64■■■□□ 2.18
HOMER3-201ENST00000221222 APOBEC3HQ6NTF7 200 aaKnown RBP28.64■■■□□ 2.18
HOMER3-201ENST00000221222 KBTBD3Q8NAB2 608 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms