RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DNAJC25Q9H1X3 360 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 PFDN1O60925 122 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 AMOTQ4VCS5 1084 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 HHATQ5VTY9 493 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 BMP15O95972 392 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 GPTP24298 496 aa16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
SPTLC2-201ENST00000216484 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 VGLL3A8MV65 326 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 APOEP02649 317 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 PPP4R1Q8TF05 950 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 PALM3A6NDB9 673 aaPredicted RBP16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 MUM1L1Q5H9M0 696 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 HDAC9Q9UKV0 1011 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 BAG2O95816 211 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 SP4Q02446 784 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 SESN3P58005 492 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 SLC12A5Q9H2X9 1139 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 PDS5BQ9NTI5 1447 aa16.34■□□□□ 0.21
SPTLC2-201ENST00000216484 JPH4Q96JJ6 628 aa16.33■□□□□ 0.21
SPTLC2-201ENST00000216484 BCAP29Q9UHQ4 241 aa16.33■□□□□ 0.21
SPTLC2-201ENST00000216484 DNAJC8O75937 253 aaPredicted RBP16.33■□□□□ 0.21
SPTLC2-201ENST00000216484 ZSCAN22P10073 491 aaPredicted RBP16.33■□□□□ 0.21
SPTLC2-201ENST00000216484 FAF1Q9UNN5 650 aaPredicted RBP16.33■□□□□ 0.21
SPTLC2-201ENST00000216484 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.33■□□□□ 0.21
SPTLC2-201ENST00000216484 PPP1R12AO14974 1030 aaPredicted RBP16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 CNGA4Q8IV77 575 aa16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 RNF8O76064 485 aa16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 PEX19P40855 299 aa16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 KRT23Q9C075 422 aa16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 OGFRQ9NZT2 677 aa16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 ZNF622Q969S3 477 aaKnown RBP eCLIP16.33■□□□□ 0.23e-7■■■□□ 14.9
SPTLC2-201ENST00000216484 FNBP1Q96RU3 617 aa16.33■□□□□ 0.2
SPTLC2-201ENST00000216484 STX17P56962 302 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 DENND2CQ68D51 928 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 USP48Q86UV5 1035 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 HMG20BQ9P0W2 317 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 ARHGAP42A6NI28 874 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 C8orf74Q6P047 294 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 IFT20Q8IY31 132 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 SDCCAG3Q96C92 435 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 HARSP12081 509 aaKnown RBP16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 SLC12A2P55011 1212 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 CDC5LQ99459 802 aaKnown RBP16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 TRIM31Q9BZY9 425 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 LRRC2Q9BYS8 371 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 ARHGAP25P42331 645 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 GSTO1P78417 241 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 RBSNQ9H1K0 784 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 DBN1Q16643 649 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 NSMCE1Q8WV22 266 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 KLF18A0A0U1RQI7 1052 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 PLCB1Q9NQ66 1216 aa16.32■□□□□ 0.2
SPTLC2-201ENST00000216484 IL1RL1Q01638 556 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 TBC1D9Q6ZT07 1266 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 BAG5Q9UL15 447 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 ANLNQ9NQW6 1124 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 IFNKQ9P0W0 207 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 BAIAP2L1Q9UHR4 511 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 MAP2K2P36507 400 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 ZKSCAN3Q9BRR0 538 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 SNRKQ9NRH2 765 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 GNL1P36915 607 aaPredicted RBP16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 EVCP57679 992 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 BIRC3Q13489 604 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 ANKRD20A3Q5VUR7 823 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 TUBBP07437 444 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 KRT15P19012 456 aa16.31■□□□□ 0.2
SPTLC2-201ENST00000216484 KRT2P35908 639 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 PICALMQ13492 652 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 MAP3K21Q5TCX8 1036 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 B4DLN1 442 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 LDHCP07864 332 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 RAP1GDS1P52306 607 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 MRPL12P52815 198 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 Q9H521 79 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 F8W031 263 aaPredicted RBP16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 TSHZ3Q63HK5 1081 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 WAPLQ7Z5K2 1190 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 ZNF710Q8N1W2 664 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 TRIM4Q9C037 500 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 SCHIP1Q9P0W5 487 aaPredicted RBP16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 CHMP2AO43633 222 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 TMPOP42166 694 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 NOP9Q86U38 636 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 ASIC3Q9UHC3 531 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 NFE2L2Q16236 605 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 DTHD1Q6ZMT9 781 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 FAM200AQ8TCP9 573 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 MRPS27Q92552 414 aaKnown RBP16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 EFCC1Q9HA90 598 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 F6X3S4 739 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 MAFGO15525 162 aa16.3■□□□□ 0.2
SPTLC2-201ENST00000216484 MAP3K7CLP57077 242 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms