RNA–Protein interactions for RNA: ENST00000212355.8

TGFBR3-201, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 6,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-201ENST00000212355 RRP36Q96EU6 259 aaKnown RBP15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 SELENOOQ9BVL4 669 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 CCNT1O60563 726 aaKnown RBP15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 COBLO75128 1261 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 HSPA4P34932 840 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 ACTN2P35609 894 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 STXBP4Q6ZWJ1 553 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 EDC3Q96F86 508 aaKnown RBP15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 MRPS9P82933 396 aaKnown RBP15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 KRBA2Q6ZNG9 492 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 EYA1Q99502 592 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 FANCAO15360 1455 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 BEND3Q5T5X7 828 aa15.38■□□□□ 0.05
TGFBR3-201ENST00000212355 SLC27A2O14975 620 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 IQCGQ9H095 443 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 PSMC4P43686 418 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 PTPN21Q16825 1174 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 SNX21Q969T3 373 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 CNNM2Q9H8M5 875 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 TFCP2L1Q9NZI6 479 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 GSTO1P78417 241 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 BLZF1Q9H2G9 400 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 IL16Q14005 1332 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 JAK2O60674 1132 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 IL15P40933 162 aaPredicted RBP15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 AKAP4Q5JQC9 854 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 FCHSD1Q86WN1 690 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 TRMT44Q8IYL2 757 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 ERMNQ8TAM6 284 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 RIOK3O14730 519 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 POLR2DO15514 142 aaKnown RBP15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 CCDC122Q5T0U0 273 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 TSNARE1Q96NA8 513 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 PPP2R3AQ06190 1150 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 CLEC11AQ9Y240 323 aa15.37■□□□□ 0.05
TGFBR3-201ENST00000212355 KIAA0586Q9BVV6 1533 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 ZBTB16Q05516 673 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 DTHD1Q6ZMT9 781 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 CDC37L1Q7L3B6 337 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 NLRP3Q96P20 1036 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 BAG1Q99933 345 aaPredicted RBP15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 KCNJ14Q9UNX9 436 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 SPDYE3A6NKU9 549 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 SNX14Q9Y5W7 946 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 EVCP57679 992 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 EHBP1Q8NDI1 1231 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 PNMA6EA0A0J9YXQ4 647 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 ELF2Q15723 593 aa15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 IFI16Q16666 785 aaKnown RBP15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 UTP14CQ5TAP6 766 aaKnown RBP15.36■□□□□ 0.05
TGFBR3-201ENST00000212355 TTC21AQ8NDW8 1320 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 PRKG1Q13976 671 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 DHX32Q7L7V1 743 aaKnown RBP15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 DYMQ7RTS9 669 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 DBNDD2Q9BQY9 259 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 C6orf50Q9HD87 102 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 RPS6KB1P23443 525 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 FERP16591 822 aa15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 AATFQ9NY61 560 aaKnown RBP eCLIP15.35■□□□□ 0.05
TGFBR3-201ENST00000212355 DHX29Q7Z478 1369 aaKnown RBP15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 KRT79Q5XKE5 535 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 USH1GQ495M9 461 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 CCDC65Q8IXS2 484 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 ZBTB7BO15156 539 aaPredicted RBP15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 PPP2R5DQ14738 602 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 PPP1R21Q6ZMI0 780 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 CPLX4Q7Z7G2 160 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 SMC5Q8IY18 1101 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 ARHGAP45Q92619 1136 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 RASAL2Q9UJF2 1139 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 A0A1B0GUL7 405 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 TXKP42681 527 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 NOC4LQ9BVI4 516 aaKnown RBP15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 CBX8Q9HC52 389 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 KRT86O43790 486 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 ZFYP08048 801 aaPredicted RBP15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 CCDC121Q6ZUS5 278 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 ZNF804AQ7Z570 1209 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 CCDC94Q9BW85 323 aaPredicted RBP15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 CARD6Q9BX69 1037 aa15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 TEX13AQ9BXU3 409 aaPredicted RBP15.34■□□□□ 0.05
TGFBR3-201ENST00000212355 TRAF5O00463 557 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 RASA3Q14644 834 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 V9GY48 417 aaPredicted RBP15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 RALGAPBQ86X10 1494 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 NSD2O96028 1365 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 CFAP65Q6ZU64 1925 aaKnown RBP15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 IGSF22Q8N9C0 903 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 SEC62Q99442 399 aaKnown RBP15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 PDE4DQ08499 809 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 DNAI2Q9GZS0 605 aa15.33■□□□□ 0.04
TGFBR3-201ENST00000212355 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 AKR1B15C9JRZ8 316 aaPredicted RBP15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 ITGA6P23229 1130 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 A0A1W2PP64 1363 aa15.32■□□□□ 0.04
TGFBR3-201ENST00000212355 KDM5BQ9UGL1 1544 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms