RNA–Protein interactions for RNA: ENST00000007390.2

TSR3-201, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSR3, Length 1,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-201ENST00000007390 ZIC5Q96T25 663 aa30.9■■■□□ 2.54
TSR3-201ENST00000007390 MAST3O60307 1309 aa30.9■■■□□ 2.54
TSR3-201ENST00000007390 SEMA3EO15041 775 aa30.89■■■□□ 2.54
TSR3-201ENST00000007390 CA12O43570 354 aa30.89■■■□□ 2.54
TSR3-201ENST00000007390 VEZTQ9HBM0 779 aa30.89■■■□□ 2.54
TSR3-201ENST00000007390 AKAP2Q9Y2D5 859 aa30.89■■■□□ 2.54
TSR3-201ENST00000007390 UBE2Q2LH0YL09 131 aa30.88■■■□□ 2.53
TSR3-201ENST00000007390 ZBTB7BO15156 539 aaPredicted RBP30.88■■■□□ 2.53
TSR3-201ENST00000007390 TFCP2Q12800 502 aa30.88■■■□□ 2.53
TSR3-201ENST00000007390 TEKT1Q969V4 418 aa30.88■■■□□ 2.53
TSR3-201ENST00000007390 ZNF70Q9UC06 446 aaPredicted RBP30.88■■■□□ 2.53
TSR3-201ENST00000007390 MYH13Q9UKX3 1938 aa30.87■■■□□ 2.53
TSR3-201ENST00000007390 PHKA1P46020 1223 aa30.87■■■□□ 2.53
TSR3-201ENST00000007390 LBX1P52954 281 aa30.87■■■□□ 2.53
TSR3-201ENST00000007390 TNFAIP1Q13829 316 aa30.87■■■□□ 2.53
TSR3-201ENST00000007390 TTLL12Q14166 644 aaPredicted RBP30.87■■■□□ 2.53
TSR3-201ENST00000007390 POLA2Q14181 598 aa30.87■■■□□ 2.53
TSR3-201ENST00000007390 RASAL3Q86YV0 1011 aa30.87■■■□□ 2.53
TSR3-201ENST00000007390 TDRD3Q9H7E2 651 aaKnown RBP30.87■■■□□ 2.53
TSR3-201ENST00000007390 ADORA1P30542 326 aa30.86■■■□□ 2.53
TSR3-201ENST00000007390 CCDC102BQ68D86 513 aa30.86■■■□□ 2.53
TSR3-201ENST00000007390 ARMC9Q7Z3E5 817 aa30.86■■■□□ 2.53
TSR3-201ENST00000007390 ZDHHC15Q96MV8 337 aa30.86■■■□□ 2.53
TSR3-201ENST00000007390 SSC5DA1L4H1 1573 aa30.86■■■□□ 2.53
TSR3-201ENST00000007390 SALL1Q9NSC2 1324 aa30.85■■■□□ 2.53
TSR3-201ENST00000007390 A0A1B0GUL7 405 aa30.85■■■□□ 2.53
TSR3-201ENST00000007390 TIMM10P62072 90 aa30.85■■■□□ 2.53
TSR3-201ENST00000007390 KIF23Q02241 960 aaPredicted RBP30.85■■■□□ 2.53
TSR3-201ENST00000007390 RASA3Q14644 834 aa30.85■■■□□ 2.53
TSR3-201ENST00000007390 SSH3Q8TE77 659 aa30.85■■■□□ 2.53
TSR3-201ENST00000007390 DENND2AQ9ULE3 1009 aa30.85■■■□□ 2.53
TSR3-201ENST00000007390 MS4A1P11836 297 aa30.84■■■□□ 2.53
TSR3-201ENST00000007390 ATP8B2P98198 1209 aa30.84■■■□□ 2.53
TSR3-201ENST00000007390 SUPT20HL1Q3ZLR7 823 aa30.84■■■□□ 2.53
TSR3-201ENST00000007390 HHIPL2Q6UWX4 724 aa30.84■■■□□ 2.53
TSR3-201ENST00000007390 PDS5AQ29RF7 1337 aaKnown RBP30.83■■■□□ 2.53
TSR3-201ENST00000007390 G3BP1Q13283 466 aaKnown RBP eCLIP30.83■■■□□ 2.53
TSR3-201ENST00000007390 MAP3K11Q16584 847 aa30.83■■■□□ 2.53
TSR3-201ENST00000007390 LDLRAD1Q5T700 205 aa30.83■■■□□ 2.53
TSR3-201ENST00000007390 TNS4Q8IZW8 715 aa30.83■■■□□ 2.53
TSR3-201ENST00000007390 MVPQ14764 893 aaKnown RBP30.82■■■□□ 2.52
TSR3-201ENST00000007390 PANK1Q8TE04 598 aa30.82■■■□□ 2.52
TSR3-201ENST00000007390 XAGE2Q96GT9 111 aa30.82■■■□□ 2.52
TSR3-201ENST00000007390 C1orf115Q9H7X2 142 aa30.82■■■□□ 2.52
TSR3-201ENST00000007390 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP30.82■■■□□ 2.52
TSR3-201ENST00000007390 REM2Q8IYK8 340 aaPredicted RBP30.81■■■□□ 2.52
TSR3-201ENST00000007390 ANGEL1Q9UNK9 670 aaKnown RBP30.81■■■□□ 2.52
TSR3-201ENST00000007390 PPP1R12BO60237 982 aaPredicted RBP30.8■■■□□ 2.52
TSR3-201ENST00000007390 PRKG1Q13976 671 aa30.8■■■□□ 2.52
TSR3-201ENST00000007390 NBPF12Q5TAG4 269 aaPredicted RBP30.8■■■□□ 2.52
TSR3-201ENST00000007390 APOBEC3HQ6NTF7 200 aaKnown RBP30.8■■■□□ 2.52
TSR3-201ENST00000007390 RCAN3Q9UKA8 241 aa30.8■■■□□ 2.52
TSR3-201ENST00000007390 PRDX5P30044 214 aa30.79■■■□□ 2.52
TSR3-201ENST00000007390 TNNI2P48788 182 aa30.79■■■□□ 2.52
TSR3-201ENST00000007390 RASGRF1Q13972 1273 aa30.79■■■□□ 2.52
TSR3-201ENST00000007390 UNCXA6NJT0 531 aa30.78■■■□□ 2.52
TSR3-201ENST00000007390 LDHBP07195 334 aaKnown RBP30.78■■■□□ 2.52
TSR3-201ENST00000007390 FKBP1CQ5VVH2 108 aa30.78■■■□□ 2.52
TSR3-201ENST00000007390 TEPSINQ96N21 525 aa30.78■■■□□ 2.52
TSR3-201ENST00000007390 CSRNP1Q96S65 589 aa30.78■■■□□ 2.52
TSR3-201ENST00000007390 SAGE1Q9NXZ1 904 aa30.78■■■□□ 2.52
TSR3-201ENST00000007390 TCP10L2B9ZVM9 353 aa30.77■■■□□ 2.52
TSR3-201ENST00000007390 ZGPATQ8N5A5 531 aaKnown RBP30.77■■■□□ 2.52
TSR3-201ENST00000007390 NEUROD6Q96NK8 337 aa30.77■■■□□ 2.52
TSR3-201ENST00000007390 GPR108Q9NPR9 543 aa30.77■■■□□ 2.52
TSR3-201ENST00000007390 NOP58Q9Y2X3 529 aaKnown RBP30.77■■■□□ 2.52
TSR3-201ENST00000007390 TMOD2Q9NZR1 351 aa30.76■■■□□ 2.51
TSR3-201ENST00000007390 TSKSQ9UJT2 592 aa30.76■■■□□ 2.51
TSR3-201ENST00000007390 FZD1Q9UP38 647 aa30.76■■■□□ 2.51
TSR3-201ENST00000007390 CEP85Q6P2H3 762 aa30.75■■■□□ 2.51
TSR3-201ENST00000007390 DAGLAQ9Y4D2 1042 aa30.75■■■□□ 2.51
TSR3-201ENST00000007390 SURF6O75683 361 aaKnown RBP30.74■■■□□ 2.51
TSR3-201ENST00000007390 DIXDC1Q155Q3 683 aa30.74■■■□□ 2.51
TSR3-201ENST00000007390 FAM83AQ86UY5 434 aa30.74■■■□□ 2.51
TSR3-201ENST00000007390 TMEM39BQ9GZU3 492 aa30.74■■■□□ 2.51
TSR3-201ENST00000007390 IREB2P48200 963 aaKnown RBP30.73■■■□□ 2.51
TSR3-201ENST00000007390 CACNB3P54284 484 aa30.73■■■□□ 2.51
TSR3-201ENST00000007390 OS9Q13438 667 aaPredicted RBP30.73■■■□□ 2.51
TSR3-201ENST00000007390 USP2O75604 605 aaPredicted RBP30.72■■■□□ 2.51
TSR3-201ENST00000007390 ARID4AP29374 1257 aaPredicted RBP30.72■■■□□ 2.51
TSR3-201ENST00000007390 GORABQ5T7V8 394 aa30.72■■■□□ 2.51
TSR3-201ENST00000007390 CDAN1Q8IWY9 1227 aa30.72■■■□□ 2.51
TSR3-201ENST00000007390 RNF186Q9NXI6 227 aa30.72■■■□□ 2.51
TSR3-201ENST00000007390 TNNI3KQ59H18 835 aa30.71■■■□□ 2.51
TSR3-201ENST00000007390 FPGT-TNNI3KV9GXZ4 949 aa30.71■■■□□ 2.51
TSR3-201ENST00000007390 RPAP1Q9BWH6 1393 aaPredicted RBP30.7■■■□□ 2.51
TSR3-201ENST00000007390 SPRYD7Q5W111 196 aa30.7■■■□□ 2.51
TSR3-201ENST00000007390 SPTY2D1Q68D10 685 aaPredicted RBP30.7■■■□□ 2.51
TSR3-201ENST00000007390 SLC10A4Q96EP9 437 aa30.7■■■□□ 2.51
TSR3-201ENST00000007390 HMG20BQ9P0W2 317 aa30.7■■■□□ 2.51
TSR3-201ENST00000007390 DDX19BQ9UMR2 479 aa30.7■■■□□ 2.51
TSR3-201ENST00000007390 ANKRD13AQ8IZ07 590 aa30.69■■■□□ 2.5
TSR3-201ENST00000007390 CLMNQ96JQ2 1002 aa30.69■■■□□ 2.5
TSR3-201ENST00000007390 GAKO14976 1311 aa30.69■■■□□ 2.5
TSR3-201ENST00000007390 UQCRFS1P1P0C7P4 283 aa30.68■■■□□ 2.5
TSR3-201ENST00000007390 TM4SF4P48230 202 aa30.68■■■□□ 2.5
TSR3-201ENST00000007390 CDC42EP5Q6NZY7 148 aa30.68■■■□□ 2.5
TSR3-201ENST00000007390 SPATA5Q8NB90 893 aa30.68■■■□□ 2.5
TSR3-201ENST00000007390 ABCF2Q9UG63 623 aa30.68■■■□□ 2.5
TSR3-201ENST00000007390 AKAP11Q9UKA4 1901 aa30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms