RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Nlrp9bQ66X22 1003 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Pcdhb22Q91XZ8 794 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ddx27Q921N6 760 aaKnown RBP15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Tubgcp6G5E8P0 1769 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Hdgfl1Q2VPR5 283 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Znf18Q810A1 556 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 DlatQ8BMF4 642 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ints5Q8CHT3 1018 aa15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ktn1Q61595 1327 aaKnown RBP15.2■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Mst1rQ62190 1378 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 TrdnE9Q9K5 693 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Bach2P97303 839 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Eme2Q56A04 373 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Cdca8Q8BHX3 289 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Sgsm1Q8BPQ7 1093 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 2310002L09RikQ9D7L5 217 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Nwd1A6H603 1563 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ampd3O08739 766 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ccdc102aQ3TMW1 549 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Erich4Q3UNU4 136 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Pcdhb9E9Q5G2 828 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 1700113H08RikE9Q9Q5 327 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Eef2kO08796 724 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Nap1l1P28656 391 aaKnown RBP15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ctdnep1Q3TP92 244 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Spg7Q3ULF4 781 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Otud6bQ8K2H2 294 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ssfa2Q922B9 1252 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Krt23Q99PS0 422 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Irx4Q9QY61 515 aa15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Usp42B2RQC2 1324 aaKnown RBP15.19■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Csrnp1P59054 583 aa15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Brinp3Q499E0 766 aa15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Secisbp2lQ6A098 1086 aaKnown RBP15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ankrd23Q812A3 306 aa15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Hip1rQ9JKY5 1068 aa15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Znhit6Q3UFB2 460 aaKnown RBP15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Zkscan4Q5SZT6 480 aa15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Spata31d1bE9QA57 1361 aa15.18■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Plbd2Q3TCN2 594 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Lrrc43Q3V0L5 667 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Sptlc3Q8BG54 563 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Zfp202Q8C879 641 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 CenpqQ9CPQ5 267 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Klhl10Q9D5V2 608 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Clic4Q9QYB1 253 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Erbb4Q61527 1308 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Api5O35841 504 aaKnown RBP15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Eif6O55135 245 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Rps6ka5Q8C050 863 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Atad2Q8CDM1 1040 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Tab2Q99K90 693 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Trpm1Q2TV84 1622 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Atp1b3P97370 278 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Usp28Q5I043 1051 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Nrbp1Q99J45 535 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Npc1l1Q6T3U4 1333 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Cyp3a57D3YYZ0 503 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Dnaaf4Q8R368 420 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Suclg2Q9Z2I8 433 aa15.17■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ccdc162pQ0VG85 912 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Zfp317Q8C0Q5 607 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Klhl30Q8C3F7 581 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Nfe2l3Q9WTM4 660 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Gm30191A0A0U1RNT7 187 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Nfil3O08750 462 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Clic6Q8BHB9 596 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Pcdhb15Q91Y04 786 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Dydc2Q9D3X8 139 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Polr2dQ9D7M8 142 aaKnown RBP15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Add2Q9QYB8 725 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Susd4Q8BH32 490 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Cfap45Q9D9U9 551 aa15.16■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Atp2b1G5E829 1220 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ptgs1P22437 602 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Stim1P70302 685 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 ItpripQ3TNL8 555 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Bola3Q8CEI1 110 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Slc4a8Q8JZR6 1089 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Gm20425E9Q035 978 aaKnown RBP15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 SrprbP47758 269 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Slc13a4Q8BZ82 625 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Nod2Q8K3Z0 1020 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Vps18Q8R307 973 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 NktrP30415 1453 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Clec11aO88200 328 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Anp32eP97822 260 aaKnown RBP15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Ano2Q8CFW1 1002 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Osbpl5Q9ER64 874 aa15.15■□□□□ 0.02
Pdgfra-205ENSMUST00000201711 Hspa1lP16627 641 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Glg1Q61543 1175 aaKnown RBP15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Atg9aQ68FE2 551 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Cep135Q6P5D4 1140 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 CerkQ8K4Q7 531 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Chaf1aQ9QWF0 911 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Usp32F8VPZ3 1604 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Rps8P62242 208 aaKnown RBP15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Cnga2Q62398 664 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Lrrcc1Q69ZB0 1026 aa15.14■□□□□ 0.01
Pdgfra-205ENSMUST00000201711 Ubxn10Q8BG34 277 aa15.14■□□□□ 0.01
Retrieved 100 of 22,080 RNA–protein pairs in 23.2 ms