RNA–Protein interactions for RNA: ENSMUST00000081654.12

Col18a1-202, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

TSL 1 (best) BASIC

Gene Col18a1, Length 5,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-202ENSMUST00000081654 Nfil3O08750 462 aa18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ddx17Q501J6 650 aaKnown RBP18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Zkscan4Q5SZT6 480 aa18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Kdm1aQ6ZQ88 853 aa18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Cfap65Q3V0B4 1847 aa18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 AU022751B1B0V2 589 aa18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 1700006A11RikB9EHI3 544 aa18.43■□□□□ 0.54
Col18a1-202ENSMUST00000081654 FancaQ9JL70 1439 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Kiaa1211Q5PR69 1207 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Igbp1Q61249 340 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ctr9Q62018 1173 aaKnown RBP18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Atp10aO54827 1508 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Chmp6P0C0A3 200 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ccdc162pQ0VG85 912 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Bbof1Q3V079 533 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ubash3aQ3V3E1 624 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Uba5Q8VE47 403 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 InsrrQ9WTL4 1300 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Atp2b1G5E829 1220 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Gse1Q3U3C9 1213 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Nsrp1Q5NCR9 542 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Iffo1Q8BXL9 562 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Znf428Q8C1M2 176 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Mrps25Q9D125 171 aaKnown RBP18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 PrkcshO08795 521 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Plcd1Q8R3B1 756 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ccdc94Q9D6J3 314 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Mx2Q9WVP9 655 aa18.42■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Bin2D3Z6Q9 489 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Rpl13P47963 211 aaKnown RBP18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Plbd2Q3TCN2 594 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Stoml1Q8CI66 399 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Psrc1Q9D0P7 329 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Gm1993A6X8I0 212 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 SlxD3Z347 212 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 InhbeO08717 350 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ube3aO08759 870 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Dhx38Q80X98 1228 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 SdsQ8VBT2 327 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 NapaQ9DB05 295 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Gm42641I6L9G2 585 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Tcerg1lQ3B807 590 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 AtripQ8BMG1 785 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Tsr2Q8C8T8 191 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Uhrf1bp1lA2RSJ4 1457 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Usp19Q3UJD6 1360 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ftl2P49945 183 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Chl1P70232 1209 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Dzip1lQ499E4 774 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Pex1Q5BL07 1284 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ccdc189Q6NZQ0 333 aa18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 HmcesQ8R1M0 353 aaKnown RBP18.41■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Stac3Q8BZ71 360 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ppfibp1Q8C8U0 969 aaKnown RBP18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Fmnl3Q6ZPF4 1028 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 AdpgkQ8VDL4 496 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Anxa1P10107 346 aaKnown RBP18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 CalrP14211 416 aaKnown RBP18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Sp4Q62445 782 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Ifih1Q8R5F7 1025 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Csrnp1P59054 583 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Map3k12Q60700 888 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Zbtb40Q6PCS8 1258 aa18.4■□□□□ 0.54
Col18a1-202ENSMUST00000081654 Lzts2Q91YU6 671 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Yeats4Q9CR11 227 aaKnown RBP18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Gm28919A0A087WP35 240 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Tbc1d2B1AVH7 922 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Edc3Q8K2D3 508 aaKnown RBP18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Ccdc89Q9DA73 370 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Hdac6Q9Z2V5 1149 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Prl7a2O54831 253 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Cbx1P83917 185 aaKnown RBP18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Disp3A3KFU9 1347 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Olfr247E9PVJ7 320 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Olfr819K7N727 320 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Ets1P27577 440 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 FanccP50652 591 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 VrtnQ3SYK4 740 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Tut1Q8R3F9 869 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Azi2Q9QYP6 405 aa18.39■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Dact3Q0PHV7 610 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Haus6Q6NV99 933 aaKnown RBP18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Tmem119Q8R138 280 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Ssfa2Q922B9 1252 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Zcrb1Q9CZ96 217 aaKnown RBP18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 CoilQ5SU73 570 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Ccdc170D3YXL0 722 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Rasal2E9PW37 1286 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Foxp4Q9DBY0 795 aaKnown RBP18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Wdr93Q402B2 695 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Tmx3Q8BXZ1 456 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Fam76aQ922G2 307 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Kif2cQ922S8 721 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Kcnh3Q9WVJ0 1095 aa18.38■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Ppp1r9aH3BJD6 1292 aa18.37■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Mdh1bQ5F204 500 aa18.37■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Myl10Q62082 202 aa18.37■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Rps8P62242 208 aaKnown RBP18.37■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Large2Q5XPT3 690 aa18.37■□□□□ 0.53
Col18a1-202ENSMUST00000081654 Tubb4bP68372 445 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms