RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Cd248Q91V98 765 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Rbm43Q99J64 343 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 1700018B08RikQ9DA83 213 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Slc4a4O88343 1079 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Stag1Q9D3E6 1258 aa27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Psma5Q9Z2U1 241 aaKnown RBP27.09■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Adgra3Q7TT36 1310 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Pet2A2AHY8 747 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Casq1O09165 405 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 XpcP51612 930 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Kif22Q3V300 660 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Tmem179Q8BHH9 233 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Rps6kb1Q8BSK8 525 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Mrpl50Q8VDT9 159 aaKnown RBP27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 SnrkQ8VDU5 748 aa27.08■■□□□ 1.93
Upf3a-201ENSMUST00000043767 Kifc2O08672 792 aa27.07■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Mxd3Q80US8 206 aa27.07■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Ccdc158Q8CDI6 1109 aa27.07■■□□□ 1.92
Upf3a-201ENSMUST00000043767 KinQ8K339 391 aa27.07■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Pof1bQ8K4L4 587 aa27.07■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Gtf2iQ9ESZ8 998 aaKnown RBP27.07■■□□□ 1.92
Upf3a-201ENSMUST00000043767 WdpcpQ8C456 722 aa27.06■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Olfr247E9PVJ7 320 aa27.05■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Olfr819K7N727 320 aa27.05■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Taf1dQ9D4V4 322 aa27.05■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Cyp2d34L7N463 504 aa27.05■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Chd5A2A8L1 1946 aa27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Klrk1O54709 232 aa27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 NesQ6P5H2 1864 aaKnown RBP27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Usp17lbE9Q9U0 468 aa27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Smarce1O54941 411 aaKnown RBP27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Bnip3O55003 187 aa27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Plekhg6Q8R0J1 787 aa27.04■■□□□ 1.92
Upf3a-201ENSMUST00000043767 NapbP28663 298 aa27.03■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Filip1lQ6P6L0 1131 aa27.03■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Eaf2Q91ZD6 262 aa27.03■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Epb41l3Q9WV92 929 aa27.03■■□□□ 1.92
Upf3a-201ENSMUST00000043767 CpdO89001 1377 aa27.02■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Fbxl16A2RT62 479 aa27.02■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Prss40A6H6T1 365 aa27.02■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Cnot6lQ8VEG6 555 aa27.02■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Ttc5Q99LG4 440 aa27.02■■□□□ 1.92
Upf3a-201ENSMUST00000043767 Mtmr2Q9Z2D1 643 aa27.02■■□□□ 1.92
Upf3a-201ENSMUST00000043767 ImmtQ8CAQ8 757 aaKnown RBP27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Pla2g12bQ99P27 195 aa27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Elmsan1E9Q2I4 1089 aaKnown RBP27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Dhx16G3X8X0 1044 aaKnown RBP27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Gnat2P50149 354 aa27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Nell2Q61220 819 aa27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Agtpbp1Q641K1 1218 aa27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Znf18Q810A1 556 aa27.01■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Tgfb2P27090 414 aa27■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Fam170aQ66LM6 333 aa27■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Atad2Q8CDM1 1040 aa27■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Cchcr1Q8K2I2 770 aa27■■□□□ 1.91
Upf3a-201ENSMUST00000043767 AaasP58742 546 aa26.99■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Jag1Q9QXX0 1218 aa26.99■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Aox3G3X982 1335 aa26.99■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Col20a1Q923P0 1320 aa26.99■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Gm21985Q6P6P5 1106 aa26.99■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Bag4Q8CI61 457 aa26.99■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Pnpla6Q3TRM4 1355 aa26.98■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Exosc10P56960 887 aaKnown RBP26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Esyt2Q3TZZ7 845 aa26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Usp21Q9QZL6 566 aa26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Scn9aQ62205 1984 aa26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Syt1P46096 421 aa26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 HelbQ6NVF4 1074 aa26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 MlphQ91V27 590 aa26.97■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Gm29094F6Q785 221 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Pald1P70261 859 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Zkscan1Q8BGS3 561 aaKnown RBP26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Dennd3A2RT67 1274 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 1700006A11RikB9EHI3 544 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Mum1l1Q4VA55 681 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Adck5Q80V03 582 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Tmx3Q8BXZ1 456 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Sil1Q9EPK6 465 aa26.96■■□□□ 1.91
Upf3a-201ENSMUST00000043767 FAM186AQ9D9R9 1790 aa26.95■■□□□ 1.91
Upf3a-201ENSMUST00000043767 Paxip1Q6NZQ4 1056 aa26.95■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Bloc1s4Q8VED2 215 aa26.95■■□□□ 1.9
Upf3a-201ENSMUST00000043767 PtmsQ9D0J8 101 aaKnown RBP26.95■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Cyp3a59D3Z2W7 503 aa26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Spata5Q3UMC0 893 aaKnown RBP26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 AsnsQ61024 561 aa26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 DekQ7TNV0 380 aaKnown RBP26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Trim44Q9QXA7 346 aa26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Atp6v1dP57746 247 aa26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Rrp12Q6P5B0 1295 aaKnown RBP26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Zbtb43Q9DAI4 467 aa26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Gdpd2Q9ESM6 539 aa26.94■■□□□ 1.9
Upf3a-201ENSMUST00000043767 PrimpolQ6P1E7 537 aa26.93■■□□□ 1.9
Upf3a-201ENSMUST00000043767 ParnQ8VDG3 624 aa26.93■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Efcc1Q9JJF6 558 aa26.93■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Lipo1J3QME6 396 aa26.93■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Casp12O08736 419 aa26.93■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Stn1Q8K2X3 378 aa26.93■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Myh2G3UW82 1942 aa26.92■■□□□ 1.9
Upf3a-201ENSMUST00000043767 ImpactO55091 318 aa26.92■■□□□ 1.9
Upf3a-201ENSMUST00000043767 Rad23bP54728 416 aa26.92■■□□□ 1.9
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms