RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ATP6V1G1O75348 118 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 SPDEFO95238 335 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 KRASP01116 189 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 CCL3L1P16619 93 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 GNG10P50151 68 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 CAV2P51636 162 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ATP5IP56385 69 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-215ENST00000641371 DSCR9P59020 149 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 TNFRSF9Q07011 255 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 PDLIM3Q53GG5 364 aaPredicted RBP7.97□□□□□ -1.13
PHGDH-215ENST00000641371 NCR3LG1Q68D85 454 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 BTNL3Q6UXE8 466 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF429Q86V71 674 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ODF3L1Q8IXM7 274 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 PDZD9Q8IXQ8 264 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ABHD12Q8N2K0 398 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 STPG2Q8N412 459 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 OR4A16Q8NH70 328 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 OR4A5Q8NH83 315 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 RNF141Q8WVD5 230 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 GPHA2Q96T91 129 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ZNF251Q9BRH9 671 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 CLEC7AQ9BXN2 247 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 SLC35D1Q9NTN3 355 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 ARID1AO14497 2285 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 NBEAQ8NFP9 2946 aa7.97□□□□□ -1.13
PHGDH-215ENST00000641371 MALRD1Q5VYJ5 2156 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 MSGN1A6NI15 193 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 A8MXK9 166 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 NUDT19A8MXV4 375 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 LYNX1G3V0Z9 82 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 SLC31A2O15432 143 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 CHST1O43916 411 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 RAMP3O60896 148 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 RBMXL2O75526 392 aaKnown RBP7.96□□□□□ -1.14
PHGDH-215ENST00000641371 LYNX1P0DP58 116 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 COX6B1P14854 86 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 G6PCP35575 357 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 CEACAM3P40198 252 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 SULT1A1P50225 295 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 RAB5CP51148 216 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 SPCS3P61009 180 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 UBE2KP61086 200 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 EWSR1Q01844 656 aaKnown RBP eCLIP7.96□□□□□ -1.14
PHGDH-215ENST00000641371 ATP6V1FQ16864 119 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 RPL39P5Q59GN2 51 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 CXorf66Q5JRM2 361 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-215ENST00000641371 AVPI1Q5T686 147 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 TGIF2LXQ8IUE1 241 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 PUSL1Q8N0Z8 303 aaKnown RBP7.96□□□□□ -1.14
PHGDH-215ENST00000641371 TMEM252Q8N6L7 170 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 OR5AN1Q8NGI8 311 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 OR4C13Q8NGP0 309 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 OR1S2Q8NGQ3 325 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 IGFBPL1Q8WX77 278 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 BBC3Q96PG8 261 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-215ENST00000641371 CCL19Q99731 98 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 UNKLQ9H9P5 680 aaKnown RBP7.96□□□□□ -1.14
PHGDH-215ENST00000641371 CYTL1Q9NRR1 136 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 FBXL17Q9UF56 701 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 PFDN2Q9UHV9 154 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 PRNDQ9UKY0 176 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 KPTNQ9Y664 436 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 KALRNO60229 2985 aa7.96□□□□□ -1.14
PHGDH-215ENST00000641371 IGHV2-26A0A0B4J1V2 119 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 A0A0G2JRQ6 117 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 A0A1W2PPR1 153 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 KIAA1324LA8MWY0 1029 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 OOSP1A8MZH6 123 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 SOX15O60248 233 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 PROP1O75360 226 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 FOXH1O75593 365 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 FCN3O75636 299 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 MMP23AO75900 390 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 TSPAN9O75954 239 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 CFDP00746 253 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 SEC11BP0C7V7 166 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 PAX1P15863 534 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 CDKN1AP38936 164 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 LGALS7P47929 136 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 HLA-DRB5Q30154 266 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 TMEM177Q53S58 311 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 OR2B11Q5JQS5 317 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 MRPL41Q8IXM3 137 aaKnown RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 PINX1Q96BK5 328 aaKnown RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 GNPNAT1Q96EK6 184 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 SAT2Q96F10 170 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 TSNAXQ99598 290 aaKnown RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 RNF5Q99942 180 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 PIMREGQ9BSJ6 248 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 PARD6GQ9BYG4 376 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 ARV1Q9H2C2 271 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 HIPK2Q9H2X6 1198 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 BET1LQ9NYM9 111 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 PSENENQ9NZ42 101 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 FOXA2Q9Y261 457 aaPredicted RBP7.95□□□□□ -1.14
PHGDH-215ENST00000641371 ZNF257Q9Y2Q1 563 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 WASHC3Q9Y3C0 194 aa7.95□□□□□ -1.14
PHGDH-215ENST00000641371 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
PHGDH-215ENST00000641371 MEX3AA1L020 520 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms