RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 UBE2NLQ5JXB2 153 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 UNQ5815/PRO19632Q6UWF5 114 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 OVCH2Q7RTZ1 564 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 HOGA1Q86XE5 327 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 BVESQ8NE79 360 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 BEST4Q8NFU0 473 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 DUX3Q96PT4 197 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 AUNIPQ9H7T9 357 aa13.77□□□□□ -0.21
PTPN11-207ENST00000639857 XRCC3O43542 346 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 NFYAP23511 347 aaPredicted RBP13.76□□□□□ -0.21
PTPN11-207ENST00000639857 RPS19P39019 145 aaKnown RBP13.76□□□□□ -0.21
PTPN11-207ENST00000639857 ARPC4P59998 168 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 UBE2KP61086 200 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 ZNF616Q08AN1 781 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 VMA21Q3ZAQ7 101 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 TEX45Q8NA69 505 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 OR11H1Q8NG94 326 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 S100A16Q96FQ6 103 aaKnown RBP13.76□□□□□ -0.21
PTPN11-207ENST00000639857 CLCC1Q96S66 551 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 HSD17B10Q99714 261 aaKnown RBP13.76□□□□□ -0.21
PTPN11-207ENST00000639857 GNB4Q9HAV0 340 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 TPSG1Q9NRR2 321 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 MRPS7Q9Y2R9 242 aaKnown RBP13.76□□□□□ -0.21
PTPN11-207ENST00000639857 RBMX2Q9Y388 322 aaKnown RBP13.76□□□□□ -0.21
PTPN11-207ENST00000639857 PRELID3BQ9Y3B1 194 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 TNCP24821 2201 aa13.76□□□□□ -0.21
PTPN11-207ENST00000639857 LINC00473A8K010 186 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 CREBL2O60519 120 aaPredicted RBP13.75□□□□□ -0.21
PTPN11-207ENST00000639857 BRI3O95415 125 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 CRYZL1O95825 349 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 RAB25P57735 213 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 DCTN2Q13561 401 aaKnown RBP13.75□□□□□ -0.21
PTPN11-207ENST00000639857 C9orf66Q5T8R8 295 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 KCTD9Q7L273 389 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 LFNGQ8NES3 379 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 OR1N2Q8NGR9 330 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 SLC25A46Q96AG3 418 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 FAM103A1Q9BTL3 118 aaKnown RBP13.75□□□□□ -0.21
PTPN11-207ENST00000639857 A3GALT2U3KPV4 340 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 DNAH3Q8TD57 4116 aa13.75□□□□□ -0.21
PTPN11-207ENST00000639857 ARPC1BO15143 372 aaKnown RBP13.74□□□□□ -0.21
PTPN11-207ENST00000639857 CNIH1O95406 144 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 IGLV2-14P01704 120 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 LGALS1P09382 135 aaKnown RBP13.74□□□□□ -0.21
PTPN11-207ENST00000639857 TGFBR1P36897 503 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 KRTAP10-11P60412 298 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 SSBP2P81877 361 aaPredicted RBP13.74□□□□□ -0.21
PTPN11-207ENST00000639857 GRPEL2Q8TAA5 225 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 CMTM3Q96MX0 182 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 FUNDC2Q9BWH2 189 aa13.74□□□□□ -0.21
PTPN11-207ENST00000639857 IGKV1D-13A0A0B4J2D9 117 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 SRRM4A7MD48 611 aaKnown RBP13.73□□□□□ -0.21
PTPN11-207ENST00000639857 RAMP3O60896 148 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 IGKV1-13P0DP09 117 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 HOXD3P31249 432 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-207ENST00000639857 INSL3P51460 131 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 LSM3P62310 102 aaKnown RBP13.73□□□□□ -0.21
PTPN11-207ENST00000639857 EIF4EBP1Q13541 118 aaPredicted RBP13.73□□□□□ -0.21
PTPN11-207ENST00000639857 TMEM69Q5SWH9 247 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 ZNF66Q6ZN08 573 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 ZBTB34Q8NCN2 500 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 OR13F1Q8NGS4 319 aa13.73□□□□□ -0.21
PTPN11-207ENST00000639857 GNB1P62873 340 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 DGCR2P98153 550 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 CDK10Q15131 360 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 PRSS8Q16651 343 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 ASPHD1Q5U4P2 390 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 GVQW1Q8N7I0 195 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 SAMD12Q8N8I0 201 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 POC5Q8NA72 575 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 OR5AP2Q8NGF4 316 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 OR4S2Q8NH73 311 aa13.72□□□□□ -0.21
PTPN11-207ENST00000639857 SEC14L6B5MCN3 397 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 K7EIL1 84 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 FCGR3BO75015 233 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 PPYP01298 95 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 AADACP22760 399 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 FCGR2CP31995 323 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 KIR2DS2P43631 304 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 TPPP2P59282 170 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 PJVKQ0ZLH3 352 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 MRGPRG-AS1Q2M3A8 158 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 VSTM2AQ8TAG5 236 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 ACOT12Q8WYK0 555 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 SNAPC3Q92966 411 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 BORCS5Q969J3 196 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 IFT46Q9NQC8 304 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 ANAPC10Q9UM13 185 aa13.71□□□□□ -0.21
PTPN11-207ENST00000639857 A0A0G2JLM5 398 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 LINC01619G3V211 115 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 J3QRK9 145 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 APOA1P02647 267 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 TRGV3P03979 118 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 TAS2R20P59543 309 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 NCS1P62166 190 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 RPL30P62888 115 aaKnown RBP13.7□□□□□ -0.22
PTPN11-207ENST00000639857 MMD2Q8IY49 270 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 GIMAP1Q8WWP7 306 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 RHOVQ96L33 236 aa13.7□□□□□ -0.22
PTPN11-207ENST00000639857 OR5B12Q96R08 314 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms