RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	SPERT	Q8NA61	448 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	UBAC2	Q8NBM4	344 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	COQ8A	Q8NI60	647 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	NDNF	Q8TB73	568 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	LRRC20	Q8TCA0	184 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	TMIGD2	Q96BF3	282 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	ROPN1L	Q96C74	230 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	SLC35G5	Q96KT7	338 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	KCNS3	Q9BQ31	491 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	BPESC1	Q9GZL8	116 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	ZNF442	Q9H7R0	627 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	HDGFL3	Q9Y3E1	203 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	WNK2	Q9Y3S1	2297 aa		4.16	□□□□□ -1.74
SMARCA2-238	ENST00000635273	ARHGAP32	A7KAX9	2087 aa		4.15	□□□□□ -1.74
SMARCA2-238	ENST00000635273	IGHV1-18	A0A0C4DH31	117 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	HMGN4	O00479	90 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TCF21	O43680	179 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	EIF1B	O60739	113 aa	Known RBP	4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	PTTG1	O95997	202 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	GCG	P01275	180 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	ADRA2A	P08913	450 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	IGFBP3	P17936	291 aa	Predicted RBP	4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TALDO1	P37837	337 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	POLR2H	P52434	150 aa	Known RBP	4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SNRPD2	P62316	118 aa	Known RBP	4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	EMX2	Q04743	252 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	FUT5	Q11128	374 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	VAMP3	Q15836	100 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	HSP90B2P	Q58FF3	399 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TMPRSS11A	Q6ZMR5	421 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	NATD1	Q8N6N6	113 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CYB561D1	Q8N8Q1	229 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273		Q8N9L7	120 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	DDIT4L	Q96D03	193 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CYYR1	Q96J86	154 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TEAD3	Q99594	435 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TMEM243	Q9BU79	118 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	PLA2G12A	Q9BZM1	189 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	DPY30	Q9C005	99 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	RAB1B	Q9H0U4	201 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CA10	Q9NS85	328 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	MARCO	Q9UEW3	520 aa	Predicted RBP	4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SLC35A3	Q9Y2D2	325 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273		V9GYY9	64 aa		4.15	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SVEP1	Q4LDE5	3571 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	ZNF879	B4DU55	563 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	hCG_2039718	K7EN88	272 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SLC22A5	O76082	557 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	YIF1A	O95070	293 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CECR9	P0C854	216 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CCNO	P22674	350 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	COL8A2	P25067	703 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	FKBP2	P26885	142 aa	Known RBP	4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	S100A3	P33764	101 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	POLR2I	P36954	125 aa	Known RBP	4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	PPOX	P50336	477 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	IDH3G	P51553	393 aa	Predicted RBP	4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	HPCA	P84074	193 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SYCN	Q0VAF6	134 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR1Q1	Q15612	314 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SMUG1	Q53HV7	270 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	MRPL2	Q5T653	305 aa	Known RBP	4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273		Q6P435	159 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CALHM1	Q8IU99	346 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SLC30A8	Q8IWU4	369 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C17orf78	Q8N4C9	275 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR8J2	Q8NGG1	315 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR6N1	Q8NGY5	312 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR51A7	Q8NH64	312 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	DOK1	Q99704	481 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	TAPBPL	Q9BX59	468 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	HINT2	Q9BX68	163 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	PRRG3	Q9BZD7	231 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR52D1	Q9H346	318 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	METTL17	Q9H7H0	456 aa	Predicted RBP	4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	RBMX2	Q9Y388	322 aa	Known RBP	4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	KLF12	Q9Y4X4	402 aa		4.14	□□□□□ -1.75
SMARCA2-238	ENST00000635273	KRBOX1	C9JBD0	128 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	LINC01619	G3V211	115 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	BPGM	P07738	259 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CDKN2C	P42773	168 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	KIR3DL2	P43630	455 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	GPR4	P46093	362 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	RPL14	P50914	215 aa	Known RBP	4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	HCCS	P53701	268 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	AQP5	P55064	265 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	COPZ1	P61923	177 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	HOXC5	Q00444	222 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	IFFO1	Q0D2I5	559 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C1D	Q13901	141 aa	Known RBP	4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	CASP8	Q14790	479 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C1orf140	Q5VVS0	124 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	AP1AR	Q63HQ0	302 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	SAXO2	Q658L1	398 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C3orf56	Q8N813	242 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	C19orf18	Q8NEA5	215 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR10Z1	Q8NGY1	313 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	OR52P1P	Q8NH57	321 aa		4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	FLYWCH2	Q96CP2	140 aa	Known RBP	4.13	□□□□□ -1.75
SMARCA2-238	ENST00000635273	NEURL3	Q96EH8	262 aa		4.13	□□□□□ -1.75

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