RNA–Protein interactions for RNA: ENST00000620033.4

CHL1-216, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 7,311 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-216ENST00000620033 CNIH2Q6PI25 160 aa3.84□□□□□ -1.8
CHL1-216ENST00000620033 SPSB3Q6PJ21 355 aa3.84□□□□□ -1.8
CHL1-216ENST00000620033 ZNF66Q6ZN08 573 aa3.84□□□□□ -1.8
CHL1-216ENST00000620033 KCNRGQ8N5I3 272 aa3.84□□□□□ -1.8
CHL1-216ENST00000620033 FAM216BQ8N7L0 139 aa3.84□□□□□ -1.8
CHL1-216ENST00000620033 LSM10Q969L4 123 aaKnown RBP3.84□□□□□ -1.8
CHL1-216ENST00000620033 CTDSP1Q9GZU7 261 aa3.84□□□□□ -1.8
CHL1-216ENST00000620033 MRM2Q9UI43 246 aaKnown RBP3.84□□□□□ -1.8
CHL1-216ENST00000620033 TRAV39A0A0B4J263 110 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 LY6HO94772 140 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SPDEFO95238 335 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 P01737 135 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 IL11P20809 199 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SLC38A11Q08AI6 406 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 ASPHD2Q6ICH7 369 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 LRRC75A-AS1Q8N1F1 130 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 ZNRF1Q8ND25 227 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 DMRTA2Q96SC8 542 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RPS10P5Q9NQ39 176 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RBFOX1Q9NWB1 397 aaKnown RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 SIP14410 1827 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 IGKV2D-24A0A075B6R9 120 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 A0A0A6YYJ9 748 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 C17orf51A8MQB3 221 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 CST4P01036 141 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 HRH1P35367 487 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 BATFQ16520 125 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SPATA25Q9BR10 227 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 OR51J1Q9H342 316 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 CACNG5Q9UF02 275 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SPAG17Q6Q759 2223 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 FAM223BA6NKX1 122 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 PPP6CO00743 305 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 CD7P09564 240 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SLC25A1P53007 311 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SYNJ2BPP57105 145 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 FCN2Q15485 313 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 FAM223AQ8IWN6 122 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SLC7A5P1Q8MH63 180 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 ZNF485Q8NCK3 441 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RXFP4Q8TDU9 374 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 NAA60Q9H7X0 242 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 Q9HAA7 133 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 CBY1Q9Y3M2 126 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 PARP14Q460N5 1801 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 FOXI3A8MTJ6 420 aaPredicted RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 E5RGE8 158 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 TSPAN2O60636 221 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SAA4P35542 130 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 DEFA6Q01524 100 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 INSL4Q14641 139 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 PIGYQ3MUY2 71 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RFPL4BQ6ZWI9 263 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 OR2D3Q8NGH3 330 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 USMG5Q96IX5 58 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SOSTQ9BQB4 213 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 FAM103A1Q9BTL3 118 aaKnown RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 TMEM133Q9H2Q1 129 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 NEU3Q9UQ49 428 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 NSG2Q9Y328 171 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 PSME4Q14997 1843 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 BRCA1P38398 1863 aaKnown RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 GGTLC3B5MD39 225 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 TYROBPO43914 113 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SNAPINO95295 136 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 SOD3P08294 240 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 KLF9Q13886 244 aaPredicted RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 VWC2Q2TAL6 325 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 KLF17Q5JT82 389 aaPredicted RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 SUN5Q8TC36 379 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RNF138Q8WVD3 245 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 NRTNQ99748 197 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 NKX6-2Q9C056 277 aaPredicted RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 C21orf62Q9NYP8 219 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 IL4P05112 153 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 CCR6P51684 374 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 RPL32P62910 135 aaKnown RBP3.83□□□□□ -1.8
CHL1-216ENST00000620033 SSX1Q16384 188 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 ZNF181Q2M3W8 571 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 OR52I2Q8NH67 350 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 NABP1Q96AH0 204 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 HRH4Q9H3N8 390 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 PLSCR4Q9NRQ2 329 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 TMEM167BQ9NRX6 74 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 VPREB3Q9UKI3 123 aa3.83□□□□□ -1.8
CHL1-216ENST00000620033 PCM1Q15154 2024 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 MYO5AQ9Y4I1 1855 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 IGHV2-70DA0A0C4DH43 119 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 FAM24AA6NFZ4 105 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 E7EQL1 145 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 RPL36A-HNRNPH2H7BZ11 118 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 CA11O75493 328 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 EFNB2P52799 333 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 LCN15Q6UWW0 184 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 ZDHHC24Q6UX98 284 aa3.82□□□□□ -1.8
CHL1-216ENST00000620033 MRPL30Q8TCC3 161 aaKnown RBP3.82□□□□□ -1.8
CHL1-216ENST00000620033 PHYHIPQ92561 330 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms