RNA–Protein interactions for RNA: ENST00000602498.1

HCG18-243, Transcript of HLA complex group 18, human

TSL 3 BASIC

Gene HCG18, Length 327 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-243	ENST00000602498	RPA2	P15927	270 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	CD36	P16671	472 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	RAB6A	P20340	208 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	MC5R	P33032	325 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	FXYD4	P59646	89 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	RPL30	P62888	115 aa	Known RBP	4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	SSBP2	P81877	361 aa	Predicted RBP	4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	FHL3	Q13643	280 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	TNXA	Q16473	311 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	C19orf54	Q5BKX5	351 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	C9orf66	Q5T8R8	295 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	FAM71F2	Q6NXP2	309 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	SSX9	Q7RTT3	188 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	OVCH2	Q7RTZ1	564 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	PDPN	Q86YL7	162 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	H1FOO	Q8IZA3	346 aa	Predicted RBP	4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	RNF152	Q8N8N0	203 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	MYOZ3	Q8TDC0	251 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	SLC25A38	Q96DW6	304 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	UBE2E2	Q96LR5	201 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	TSNAX	Q99598	290 aa	Known RBP	4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	TOLLIP	Q9H0E2	274 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	RHBDL2	Q9NX52	303 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	COA4	Q9NYJ1	87 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	TAS2R8	Q9NYW2	309 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	SPATA2	Q9UM82	520 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	NUBP2	Q9Y5Y2	271 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498		S4R3C0	116 aa		4.38	□□□□□ -1.71
HCG18-243	ENST00000602498	C13orf42	A0A1B0GVH6	325 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	HMX3	A6NHT5	357 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	MSGN1	A6NI15	193 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	OVOL1	O14753	267 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	MPPED1	O15442	326 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	RBBP9	O75884	186 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	IGHV3-23	P01764	117 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	CRYGB	P07316	175 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	LGALS1	P09382	135 aa	Known RBP	4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	OR8U8	P0C7N1	319 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	SPN	P16150	400 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	AADAC	P22760	399 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	DUT	P33316	252 aa	Known RBP	4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	SERPINB10	P48595	397 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	ARPC4	P59998	168 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	RTL8B	Q17RB0	113 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	VAX1	Q5SQQ9	334 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	HACD4	Q5VWC8	232 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	ZNF562	Q6V9R5	426 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	POC5	Q8NA72	575 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	SECTM1	Q8WVN6	248 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	TCTEX1D2	Q8WW35	142 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	ACOT12	Q8WYK0	555 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	FCGR1B	Q92637	280 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	GPR61	Q9BZJ8	451 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	CCL28	Q9NRJ3	127 aa		4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	ZNF256	Q9Y2P7	627 aa	Predicted RBP	4.37	□□□□□ -1.71
HCG18-243	ENST00000602498	TRIM64C	A6NLI5	447 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	MRPS14	O60783	128 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	SPDEF	O95238	335 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	IGLV2-14	P01704	120 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	HLA-A	P01891	365 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	HSPB1	P04792	205 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	REG1A	P05451	166 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	SAA1	P0DJI8	122 aa	Predicted RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	EDN2	P20800	178 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	DTYMK	P23919	212 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	CD40LG	P29965	261 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	SLC6A1	P30531	599 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	FGF9	P31371	208 aa	Predicted RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	FCGR2C	P31995	323 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	SYNJ2BP	P57105	145 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	NCS1	P62166	190 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	PITPNA	Q00169	270 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	CBX3	Q13185	183 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	PRSS8	Q16651	343 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	MRGPRG-AS1	Q2M3A8	158 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	VMA21	Q3ZAQ7	101 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	AKIRIN2	Q53H80	203 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	TMEM177	Q53S58	311 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	RNASE12	Q5GAN4	147 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	KCTD9	Q7L273	389 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	TMEM17	Q86X19	198 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	ZNF645	Q8N7E2	425 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	BEST4	Q8NFU0	473 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	DDB2	Q92466	427 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	RHOV	Q96L33	236 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	FYTTD1	Q96QD9	318 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	RNF5	Q99942	180 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	B9D2	Q9BPU9	175 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	YTHDF1	Q9BYJ9	559 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	ZC4H2	Q9NQZ6	224 aa		4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	MRPS7	Q9Y2R9	242 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	RBMX2	Q9Y388	322 aa	Known RBP	4.36	□□□□□ -1.71
HCG18-243	ENST00000602498	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.35	□□□□□ -1.71
HCG18-243	ENST00000602498	TG	P01266	2768 aa		4.35	□□□□□ -1.71
HCG18-243	ENST00000602498	TRAV3	A0A0B4J244	114 aa		4.35	□□□□□ -1.71

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