RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MMP24Q9Y5R2 645 aa14.42□□□□□ -0.1
SHKBP1-224ENST00000600718 A0A0D9SG52 128 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 A0A0G2JRQ6 117 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 KIAA1324LA8MWY0 1029 aaPredicted RBP14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 K7EPK0 472 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 S1PR2O95136 353 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 FAM71F2Q6NXP2 309 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 CLEC2AQ6UVW9 174 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 FOXRED2Q8IWF2 684 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 FAM71E2Q8N5Q1 922 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNRD1Q9P1U0 126 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 LSM5Q9Y4Y9 91 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 POMT1Q9Y6A1 747 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 FLNCQ14315 2725 aa14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 YLPM1P49750 1951 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-224ENST00000600718 PITX3O75364 302 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 COL8A1P27658 744 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 NKX2-1P43699 371 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF345Q14585 488 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 C1orf122Q6ZSJ8 110 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 C10orf105Q8TEF2 133 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ARL6Q9H0F7 186 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 USF3Q68DE3 2245 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 IGHV2-26A0A0B4J1V2 119 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 KRASP01116 189 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 CT45A6P0DMU7 189 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 CT45A5P0DMU8 189 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 CT45A7P0DMV0 189 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 EPHA1P21709 976 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 IL3RAP26951 378 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF137PP52743 207 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ID3Q02535 119 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF787Q6DD87 383 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 LINC00518Q8N0U6 118 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 STPG2Q8N412 459 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 KCNRGQ8N5I3 272 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 KIR3DL3Q8N743 410 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ZNF383Q8NA42 475 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 OR4S2Q8NH73 311 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 CLEC7AQ9BXN2 247 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 SLC25A32Q9H2D1 315 aa14.4□□□□□ -0.1
SHKBP1-224ENST00000600718 ENSAO43768 121 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 P0C879 139 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 ZFP36P26651 326 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 G6PCP35575 357 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 DSCR9P59020 149 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 ARF6P62330 175 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 Q6ZRM9 215 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 Q8N7P7 452 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 CLRN3Q8NCR9 226 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 BEND2Q8NDZ0 799 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 ST6GALNAC6Q969X2 333 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 COA4Q9NYJ1 87 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 CACNG5Q9UF02 275 aa14.39□□□□□ -0.11
SHKBP1-224ENST00000600718 MYO18BQ8IUG5 2567 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 RNF222A6NCQ9 220 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 VWC2LB2RUY7 222 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 E5RGE8 158 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 FLI1Q01543 452 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 CXorf66Q5JRM2 361 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 OR13D1Q8NGV5 346 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 NRGNQ92686 78 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 MARC2Q969Z3 335 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 R3HDM4Q96D70 268 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 NSG2Q9Y328 171 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 IGLV1-47P01700 117 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 IZUMO4Q1ZYL8 232 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 MALRD1Q5VYJ5 2156 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 H2BFWTQ7Z2G1 175 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 PERPQ96FX8 193 aa14.38□□□□□ -0.11
SHKBP1-224ENST00000600718 DNASE2O00115 360 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-224ENST00000600718 FOXH1O75593 365 aa14.37□□□□□ -0.11
SHKBP1-224ENST00000600718 PRTN3P24158 256 aa14.37□□□□□ -0.11
SHKBP1-224ENST00000600718 AQP10Q96PS8 301 aa14.37□□□□□ -0.11
SHKBP1-224ENST00000600718 RCL1Q9Y2P8 373 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-224ENST00000600718 KPTNQ9Y664 436 aa14.37□□□□□ -0.11
SHKBP1-224ENST00000600718 MARCH11A6NNE9 402 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 MMP9P14780 707 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 NQO2P16083 231 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 PVALBP20472 110 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 ARHGDIBP52566 201 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 LCN2P80188 198 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 PAX2Q02962 417 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 RTL8BQ17RB0 113 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 HLA-DRB5Q30154 266 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 DHRS7BQ6IAN0 325 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 SLC35D1Q9NTN3 355 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 ERVK-16P61578 105 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 POLR2GP62487 172 aaKnown RBP eCLIP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 UBA52P62987 128 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 DMBX1Q8NFW5 382 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 MRPL20Q9BYC9 149 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 AMMECR1Q9Y4X0 333 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 DOCK11Q5JSL3 2073 aa14.36□□□□□ -0.11
SHKBP1-224ENST00000600718 IGHV2-70DA0A0C4DH43 119 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 FAM90A9PA6NNJ1 464 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 FAM90A26D6RGX4 464 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 WRBO00258 174 aa14.35□□□□□ -0.11
SHKBP1-224ENST00000600718 NUPL2O15504 423 aaKnown RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms