RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 OR3A3P47888 321 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 INSL3P51460 131 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 GNB1P62873 340 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 MORN2Q502X0 79 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 IGSF11Q5DX21 431 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 CCDC190Q86UF4 302 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 LINC00311Q8N616 119 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 OR1N2Q8NGR9 330 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 OR52I2Q8NH67 350 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 RTN4IP1Q8WWV3 396 aaPredicted RBP12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 YPEL2Q96QA6 119 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 RASL11BQ9BPW5 248 aa12.76□□□□□ -0.37
SHKBP1-215ENST00000597649 CTDSPLO15194 276 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 SPNP16150 400 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 VDAC1P21796 283 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 PTBP1P26599 531 aaKnown RBP eCLIP12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 ACTBP60709 375 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 GNMTQ14749 295 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 Q3ZCU0 254 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF491Q8N8L2 437 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 DCUN1D4Q92564 292 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 OR5B12Q96R08 314 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 CITED4Q96RK1 184 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 SOSTQ9BQB4 213 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 CABLES2Q9BTV7 478 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 OR1A1Q9P1Q5 309 aa12.75□□□□□ -0.37
SHKBP1-215ENST00000597649 IGKV1-6A0A0C4DH72 117 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 SLC31A2O15432 143 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 DIRAS3O95661 229 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 IL3RAP26951 378 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 HLA-DMAP28067 261 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 PPIFP30405 207 aaKnown RBP12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 ETV6P41212 452 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 TAS2R46P59540 309 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 RUNX1Q01196 453 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 OR2AK2Q8NG84 335 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 OR5H2Q8NGV7 314 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 SMIM4Q8WVI0 70 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 EDARADDQ8WWZ3 215 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 UBE2E2Q96LR5 201 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 KLK11Q9UBX7 282 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 MTFP1Q9UDX5 166 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 WSB1Q9Y6I7 421 aa12.74□□□□□ -0.37
SHKBP1-215ENST00000597649 TRBV6-7A0A0A0MS04 114 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 G3V318 75 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 OR8U8P0C7N1 319 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 NAT1P18440 290 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF134P52741 427 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 SSBP1Q04837 148 aaKnown RBP12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF616Q08AN1 781 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 CDK10Q15131 360 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 LY6G6FQ5SQ64 297 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 LINC00299Q6ZSB3 139 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF429Q86V71 674 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 SNAPC3Q92966 411 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 ABHD14AQ9BUJ0 271 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 RDH8Q9NYR8 311 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 ANAPC10Q9UM13 185 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 VSIG4Q9Y279 399 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 RBM7Q9Y580 266 aaKnown RBP12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 V9GYH0 126 aa12.73□□□□□ -0.37
SHKBP1-215ENST00000597649 GSTZ1O43708 216 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 PMP2P02689 132 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF45Q02386 682 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 ACTBL2Q562R1 376 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 CT45A1Q5HYN5 189 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 Q8N402 240 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF439Q8NDP4 499 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 OR8H1Q8NGG4 311 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 CT45A3Q8NHU0 189 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 S100ZQ8WXG8 99 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 DLX4Q92988 240 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 RITA1Q96K30 269 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 THAP7Q9BT49 309 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 ALX4Q9H161 411 aaPredicted RBP12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 ZMAT4Q9H898 229 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 TAS2R8Q9NYW2 309 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF580Q9UK33 172 aa12.72□□□□□ -0.37
SHKBP1-215ENST00000597649 OVOL1O14753 267 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 IGLV1-40P01703 118 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 IFNA6P05013 189 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 OR5H8P0DN80 308 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 GP9P14770 177 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 NFYAP23511 347 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 TAS2R19P59542 299 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 TSPAN5P62079 268 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 ADAMTSL5Q6ZMM2 481 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 SLC25A48Q6ZT89 311 aaKnown RBP12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 LYSMD2Q8IV50 215 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 TMEM229BQ8NBD8 167 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 TM2D3Q9BRN9 247 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 C11orf54Q9H0W9 315 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 EDA2RQ9HAV5 297 aa12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 ZNF107Q9UII5 783 aaPredicted RBP12.71□□□□□ -0.37
SHKBP1-215ENST00000597649 ALMS1Q8TCU4 4167 aa12.71□□□□□ -0.38
SHKBP1-215ENST00000597649 ITGB1BP1O14713 200 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms