RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 AKIRIN2Q53H80 203 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 UBE2NLQ5JXB2 153 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 REC114Q7Z4M0 266 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 PPP1R27Q86WC6 154 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 TCTEX1D1Q8N7M0 179 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 SAMD12Q8N8I0 201 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 SNAPC3Q92966 411 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 S100A16Q96FQ6 103 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 HARBI1Q96MB7 349 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 GNB4Q9HAV0 340 aa14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 AURKAIP1Q9NWT8 199 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 FOXA2Q9Y261 457 aaPredicted RBP14.38□□□□□ -0.11
SHKBP1-202ENST00000593764 SHOXO15266 292 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 RPL30P62888 115 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 TMEM267Q0VDI3 215 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 EIF4EBP1Q13541 118 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 FHL3Q13643 280 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 FXYD3Q14802 87 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 LFNGQ8NES3 379 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 ABHD5Q8WTS1 349 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 CASTOR1Q8WTX7 329 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 KCTD12Q96CX2 325 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 VSIG4Q9Y279 399 aa14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 RBMX2Q9Y388 322 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-202ENST00000593764 SLC22A5O76082 557 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 CRYZL1O95825 349 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 FCER2P06734 321 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 KRTAP10-11P60412 298 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 RUNX1Q01196 453 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 ACTBL2Q562R1 376 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 UNQ5815/PRO19632Q6UWF5 114 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 ARPC1AQ92747 370 aa14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 NAA50Q9GZZ1 169 aaKnown RBP14.36□□□□□ -0.11
SHKBP1-202ENST00000593764 FCGR2CP31995 323 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 CBX5P45973 191 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 BRWD1-AS2P59051 145 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 ARPC4P59998 168 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 EGFEM1PQ0D2K5 195 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 CBX3Q13185 183 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 CTF1Q16619 201 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 OVCH2Q7RTZ1 564 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 ANKRD13BQ86YJ7 626 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 OR11H1Q8NG94 326 aa14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 MCRIP2Q9BUT9 160 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-202ENST00000593764 MEIS3P1A6NDR6 274 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 EIF4EP06730 217 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 AADACP22760 399 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 HOXD3P31249 432 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 RAB25P57735 213 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 TAS2R20P59543 309 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 UBE2KP61086 200 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 GNB1P62873 340 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 TMEM69Q5SWH9 247 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 ASPHD1Q5U4P2 390 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 TEX45Q8NA69 505 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 OR5AP2Q8NGF4 316 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 OR5M8Q8NGP6 311 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 GRPEL2Q8TAA5 225 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 OSR1Q8TAX0 266 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 OR5B12Q96R08 314 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 COMMD3Q9UBI1 195 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 ANAPC10Q9UM13 185 aa14.34□□□□□ -0.11
SHKBP1-202ENST00000593764 FCGR3BO75015 233 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 CNIH1O95406 144 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 PYHIN1Q6K0P9 492 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 IDO2Q6ZQW0 420 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 KCTD9Q7L273 389 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 GPHA2Q96T91 129 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 GPR61Q9BZJ8 451 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 CCL28Q9NRJ3 127 aa14.33□□□□□ -0.12
SHKBP1-202ENST00000593764 GABARAPO95166 117 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 PPYP01298 95 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 CDK10Q15131 360 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 PRSS8Q16651 343 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 VMA21Q3ZAQ7 101 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 OR2B11Q5JQS5 317 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 MFSD4AQ8N468 514 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 OR1N2Q8NGR9 330 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 SECTM1Q8WVN6 248 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 GIMAP1Q8WWP7 306 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 CMTM3Q96MX0 182 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 MS4A10Q96PG2 267 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 HSD17B10Q99714 261 aaKnown RBP14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 ALX4Q9H161 411 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 PRELID3BQ9Y3B1 194 aa14.32□□□□□ -0.12
SHKBP1-202ENST00000593764 APOA1P02647 267 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 SAA1P0DJI8 122 aaPredicted RBP14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 NAT1P18440 290 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 ALDH3B2P48448 385 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 RORCP51449 518 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 ZNF616Q08AN1 781 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 MSMO1Q15800 293 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 GPR107Q5VW38 600 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 ZNF66Q6ZN08 573 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 OR5T1Q8NG75 326 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 MRAPQ8TCY5 172 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 MRPS26Q9BYN8 205 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 IFT46Q9NQC8 304 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 TAS2R8Q9NYW2 309 aa14.31□□□□□ -0.12
SHKBP1-202ENST00000593764 WI2-2373I1.2A0A1W2PRP0 233 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms