RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 SLA2Q9H6Q3 261 aa5.07□□□□□ -1.6
LIG3-206ENST00000586058 LPAR2Q9HBW0 351 aa5.07□□□□□ -1.6
LIG3-206ENST00000586058 COA4Q9NYJ1 87 aa5.07□□□□□ -1.6
LIG3-206ENST00000586058 CACNG5Q9UF02 275 aa5.07□□□□□ -1.6
LIG3-206ENST00000586058 WASHC3Q9Y3C0 194 aa5.07□□□□□ -1.6
LIG3-206ENST00000586058 POMT1Q9Y6A1 747 aa5.07□□□□□ -1.6
LIG3-206ENST00000586058 TET2Q6N021 2002 aaPredicted RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 ZZEF1O43149 2961 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 BORCS7-ASMTA0A0B4J1R7 106 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 LINC00473A8K010 186 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 CEBPZOSA8MTT3 80 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 OOSP1A8MZH6 123 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 B4DSR2 109 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 C22orf46C9J442 243 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 TAAR5O14804 337 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 SSSCA1O60232 199 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 DEDDO75618 318 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 IFNA7P01567 189 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 IGLV2-14P01704 120 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 FGF2P09038 288 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 MMP9P14780 707 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 USF1P22415 310 aaPredicted RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 GATA3P23771 443 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 G6PCP35575 357 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 P2RY1P47900 373 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 CAV2P51636 162 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 DLX6P56179 175 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 UBA52P62987 128 aaKnown RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 PLGLAQ15195 96 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 C2orf68Q2NKX9 166 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 NMSQ5H8A3 153 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 Q5PR19 223 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 TMEM65Q6PI78 240 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 MOB3BQ86TA1 216 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 IQCF2Q8IXL9 164 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 OR8H3Q8N146 312 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 C9orf62Q8N4C0 152 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 DRAXINQ8NBI3 349 aaPredicted RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 LHFPL5Q8TAF8 219 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 IGFBPL1Q8WX77 278 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 FLYWCH2Q96CP2 140 aaKnown RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 RAB40CQ96S21 281 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 GPHA2Q96T91 129 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 HIPK2Q9H2X6 1198 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 SIRT7Q9NRC8 400 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 FKBP11Q9NYL4 201 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 KIAA1456Q9P272 454 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 PAIP2BQ9ULR5 123 aaKnown RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 TNFSF18Q9UNG2 199 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 RCL1Q9Y2P8 373 aaKnown RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 TBL2Q9Y4P3 447 aaKnown RBP5.06□□□□□ -1.6
LIG3-206ENST00000586058 INSIG2Q9Y5U4 225 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 CR1P17927 2039 aa5.06□□□□□ -1.6
LIG3-206ENST00000586058 TRAV20A0A0B4J274 112 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 MPTX1A8MV57 137 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 BUB1B-PAK6H3BSN5 160 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 BCL2L11O43521 198 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 SYNGR2O43760 224 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 RAMP3O60896 148 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 MMP23AO75900 390 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 ACTL6BO94805 426 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 NXPH3O95157 252 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 IFNA17P01571 189 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 MSMBP08118 114 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 TPT1P13693 172 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 PRTN3P24158 256 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 RPL12P30050 165 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 BRS3P32247 399 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 REG1BP48304 166 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 HOXA1P49639 335 aaPredicted RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 ZNF134P52741 427 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 ZNF137PP52743 207 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 RAB14P61106 215 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 RPS16P62249 146 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 RPL30P62888 115 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 HBG1P69891 147 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 HBG2P69892 147 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 BAXQ07812 192 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 OPCMLQ14982 345 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 XP32Q5T750 250 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 MINOS1Q5TGZ0 78 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 GPR157Q5UAW9 335 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 EIF5AL1Q6IS14 154 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 SLC25A24Q6NUK1 477 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 ZNF767PQ75MW2 155 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 SSX9Q7RTT3 188 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 LILRB2Q8N423 598 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 TEX29Q8N6K0 151 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 OR4D5Q8NGN0 318 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 OR4A5Q8NH83 315 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 LHX4Q969G2 390 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 RHOVQ96L33 236 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 TSNAXQ99598 290 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 ZNF471Q9BX82 626 aaPredicted RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 MRPL20Q9BYC9 149 aaKnown RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 MS4A7Q9GZW8 240 aaPredicted RBP5.05□□□□□ -1.6
LIG3-206ENST00000586058 TMEM140Q9NV12 185 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 DPM3Q9P2X0 92 aa5.05□□□□□ -1.6
LIG3-206ENST00000586058 PRNDQ9UKY0 176 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms