RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 COPZ2Q9P299 210 aa11.59□□□□□ -0.55
NPLOC4-218ENST00000574964 NBR2O15453 112 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 FGF16O43320 207 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 PGLYRP1O75594 196 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 RLN1P04808 185 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 PI3P19957 117 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 PLGLAQ15195 96 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 KRTAP24-1Q3LI83 254 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 Q8N6K4 173 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 OR13C8Q8NGS7 320 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 OR4S2Q8NH73 311 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 DDB2Q92466 427 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 HARBI1Q96MB7 349 aa11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 C7orf50Q9BRJ6 194 aaKnown RBP11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 RANBP3Q9H6Z4 567 aaPredicted RBP11.58□□□□□ -0.56
NPLOC4-218ENST00000574964 IGKV1-16P04430 117 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 CTSDP07339 412 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 HKR1P10072 659 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 LGALS7P47929 136 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 F2RL1P55085 397 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 RAG2P55895 527 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 PIGPP57054 158 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 SURF2Q15527 256 aaPredicted RBP11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 TBC1D26Q86UD7 250 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 SPAG16Q8N0X2 631 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 OR4F5Q8NH21 305 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 TAF15Q92804 592 aaKnown RBP eCLIP11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 RITA1Q96K30 269 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 SLC2A9Q9NRM0 540 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 TNCP24821 2201 aa11.57□□□□□ -0.56
NPLOC4-218ENST00000574964 SH2D7A6NKC9 451 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 CNTFRP26992 372 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 BLCAPP62952 87 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 FOXL1Q12952 345 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 C11orf88Q6PI97 169 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 Q6ZSV7 163 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 C5orf56Q8N8D9 126 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 OR2T6Q8NHC8 308 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 OSR1Q8TAX0 266 aaPredicted RBP11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 CD300LFQ8TDQ1 290 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 C19orf24Q9BVV8 132 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 LIN7CQ9NUP9 197 aaKnown RBP11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 GPR132Q9UNW8 380 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 ATRQ13535 2644 aa11.56□□□□□ -0.56
NPLOC4-218ENST00000574964 RRHO14718 337 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 MPPED1O15442 326 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 LYRM1O43325 122 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 UPK1BO75841 260 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 NDUFA7O95182 113 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 HRASP01112 189 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 F2RP25116 425 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 RND3P61587 244 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 PSG5Q15238 335 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 VMA21Q3ZAQ7 101 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 TCTEX1D1Q8N7M0 179 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 Q8N9W7 124 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 NPBQ8NG41 125 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 TSC22D3Q99576 134 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 SLC25A21Q9BQT8 299 aaPredicted RBP11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 FBXL15Q9H469 300 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 BEX1Q9HBH7 125 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 PLSCR3Q9NRY6 295 aa11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 METTL1Q9UBP6 276 aaKnown RBP11.55□□□□□ -0.56
NPLOC4-218ENST00000574964 CUBNO60494 3623 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 TEX13DA0A0J9YY54 714 aaPredicted RBP11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 RBFOX2O43251 390 aaKnown RBP eCLIP11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 SLC25A17O43808 307 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 TSPAN9O75954 239 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 SPDEFO95238 335 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 HPRT1P00492 218 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 CCR6P51684 374 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 RELBQ01201 579 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 RBMS2Q15434 407 aaKnown RBP11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 C5orf64Q2M2E5 130 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 LIN54Q6MZP7 749 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 MZT2BQ6NZ67 158 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 MRGPRFQ96AM1 343 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 AIFM2Q9BRQ8 373 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 NF1P21359 2839 aa11.54□□□□□ -0.56
NPLOC4-218ENST00000574964 A0A1B0GUS0 222 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 TMEM89A2RUT3 159 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 PLA2G10O15496 165 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 RAMP3O60896 148 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 NDUFA3O95167 84 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 AMY1AP04745 511 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 SERPINE2P07093 398 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 AKR1C4P17516 323 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 LPAR6P43657 344 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 VDAC2P45880 294 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 ERVK-16P61578 105 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 TMED4Q7Z7H5 227 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 FAM71E2Q8N5Q1 922 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 CLCC1Q96S66 551 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 RTBDNQ9BSG5 229 aaPredicted RBP11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 C5orf66Q9H5L9 145 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 ZNF702PQ9H963 129 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 VSIG4Q9Y279 399 aa11.53□□□□□ -0.56
NPLOC4-218ENST00000574964 C3orf85A0A1B0GTC6 90 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms