RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 IFNA10P01566 189 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 HBE1P02100 147 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 CSN2P05814 226 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 HCKP08631 526 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF708P17019 499 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 FCGR2CP31995 323 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR1D4P47884 311 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SNU13P55769 128 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SUPT4H1P63272 117 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SLC35A1P78382 337 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 PMP22Q01453 160 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SCGB2A2Q13296 93 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SLC10A1Q14973 349 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 GUK1Q16774 197 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 IAH1Q2TAA2 248 aaPredicted RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 MS4A18Q3C1V0 323 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 ANKRD55Q3KP44 614 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 AARDQ4LEZ3 155 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 AADACL3Q5VUY0 350 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR52W1Q6IF63 320 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR13G1Q8NGZ3 307 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 C11orf40Q8WZ69 217 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 FBXO17Q96EF6 278 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 ADAT3Q96EY9 351 aaPredicted RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 CCL19Q99731 98 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 CMSS1Q9BQ75 279 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR8D2Q9GZM6 311 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 PNO1Q9NRX1 252 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 EHFQ9NZC4 300 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR5AC2Q9NZP5 309 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 V9GYS6 101 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 HIVEP1P15822 2718 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SCN3AQ9NY46 2000 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 A0A087WZY1 265 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 C7orf77A4D0Y5 90 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF729A6NN14 1252 aaPredicted RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 HNF1AP20823 631 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 CD80P33681 288 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 BAXQ07812 192 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR8G1Q15617 311 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR7A5Q15622 319 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 NNATQ16517 81 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 DEFB110Q30KQ9 67 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 RPL7L1Q6DKI1 246 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SSX8Q7RTT4 187 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 MARCH3Q86UD3 253 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 LGI3Q8N145 548 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 GVQW1Q8N7I0 195 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 WDSUB1Q8N9V3 476 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR5L2Q8NGL0 311 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR10G8Q8NGN5 311 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 OR13C9Q8NGT0 318 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 RBMXL1Q96E39 390 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 GNPNAT1Q96EK6 184 aaPredicted RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 MRPL53Q96EL3 112 aaKnown RBP3.38□□□□□ -1.87
LINC00561-201ENST00000565815 PECRQ9BY49 303 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 DEFB126Q9BYW3 111 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SLC25A31Q9H0C2 315 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 RPS10P5Q9NQ39 176 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 CENPMQ9NSP4 180 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 NECAP2Q9NVZ3 263 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 TREM2Q9NZC2 230 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 IL36GQ9NZH8 169 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 POLR1DQ9Y2S0 133 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 HDGFL3Q9Y3E1 203 aa3.38□□□□□ -1.87
LINC00561-201ENST00000565815 SEC14L6B5MCN3 397 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 CRTAPO75718 401 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 DHRS3O75911 302 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 VAMP5O95183 116 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 HSPB1P04792 205 aaKnown RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF44P15621 663 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 RPS27P42677 84 aaKnown RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 GUCA1AP43080 201 aaPredicted RBP3.37□□□□□ -1.87
LINC00561-201ENST00000565815 CAMLGP49069 296 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM33P57088 247 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 S100A10P60903 97 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 GNMTQ14749 295 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SLC9A3R2Q15599 337 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 HIST3H3Q16695 136 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 HIKESHIQ53FT3 197 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 Q6ZS49 121 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR51T1Q8NGJ9 327 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 NRGNQ92686 78 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR10C1Q96KK4 312 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OXGR1Q96P68 337 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 GAL3ST4Q96RP7 486 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 GPER1Q99527 375 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SMR3AQ99954 134 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 SFXN3Q9BWM7 321 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 CHST5Q9GZS9 411 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 NAA60Q9H7X0 242 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 OR2S2Q9NQN1 319 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 C19orf12Q9NSK7 152 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TMEM242Q9NWH2 141 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 NAV3Q8IVL0 2385 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 A0A0A6YYD4 124 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TRGV5A0A0B4J1U4 118 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 TRAV1-1A0A0B4J248 108 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 FAM230AA0A1W2PPH8 454 aa3.37□□□□□ -1.87
LINC00561-201ENST00000565815 ZNF726A6NNF4 738 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms