RNA–Protein interactions for RNA: ENST00000561743.5

USB1-205, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 3 BASIC

Gene USB1, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-205ENST00000561743 CENPOQ9BU64 300 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 OR51E2Q9H255 320 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 DAPK2Q9UIK4 370 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 SSR3Q9UNL2 185 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 TNCP24821 2201 aa10.41□□□□□ -0.74
USB1-205ENST00000561743 TMEM235A6NFC5 223 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 LINC00473A8K010 186 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 SHOXO15266 292 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 SAP30O75446 220 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 CNIH1O95406 144 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 TRGV3P03979 118 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 HSPB1P04792 205 aaKnown RBP10.4□□□□□ -0.74
USB1-205ENST00000561743 RRASP10301 218 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 CD40LGP29965 261 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 CBX3Q13185 183 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 ACSM6Q6P461 480 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 POC5Q8NA72 575 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 OR5T1Q8NG75 326 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 NUDCD2Q8WVJ2 157 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 ADTRPQ96IZ2 230 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 ST6GALNAC5Q9BVH7 336 aa10.4□□□□□ -0.74
USB1-205ENST00000561743 RRP15Q9Y3B9 282 aaKnown RBP10.4□□□□□ -0.74
USB1-205ENST00000561743 KMT2CQ8NEZ4 4911 aaKnown RBP10.39□□□□□ -0.75
USB1-205ENST00000561743 H3BUA1 57 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 LY86O95711 162 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 CRYZL1O95825 349 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 SDC2P34741 201 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 DCSTAMPQ9H295 470 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 RNF167Q9H6Y7 350 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 ZNF355PQ9NSJ1 428 aa10.39□□□□□ -0.75
USB1-205ENST00000561743 J3QRK9 145 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 SSX5O60225 188 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 SCGNO76038 276 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 CLEC2LP0C7M8 214 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 NHLRC4P0CG21 123 aaPredicted RBP10.38□□□□□ -0.75
USB1-205ENST00000561743 NFYAP23511 347 aaPredicted RBP10.38□□□□□ -0.75
USB1-205ENST00000561743 UBE2KP61086 200 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 PITPNAQ00169 270 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 MXD1Q05195 221 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 VMA21Q3ZAQ7 101 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 IDO2Q6ZQW0 420 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 ZNF645Q8N7E2 425 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 TEX45Q8NA69 505 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 SLC25A38Q96DW6 304 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 TMEM68Q96MH6 324 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 WWC2-AS2Q96NR7 200 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 RHBDL2Q9NX52 303 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 OR2W1Q9Y3N9 320 aa10.38□□□□□ -0.75
USB1-205ENST00000561743 IGKV1D-13A0A0B4J2D9 117 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 C13orf42A0A1B0GVH6 325 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 BRI3O95415 125 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 IGLV2-14P01704 120 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 HLA-DQB1P01920 261 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 CTXN2P0C2S0 81 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 APELAP0DMC3 54 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 IGKV1-13P0DP09 117 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 SPNP16150 400 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 GNG2P59768 71 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 DEFA5Q01523 94 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 PRSS8Q16651 343 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 CNIH2Q6PI25 160 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 OR5H6Q8NGV6 325 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 OSR1Q8TAX0 266 aaPredicted RBP10.37□□□□□ -0.75
USB1-205ENST00000561743 TINAGL1Q9GZM7 467 aaPredicted RBP10.37□□□□□ -0.75
USB1-205ENST00000561743 ANXA10Q9UJ72 324 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 SMAD5-AS1Q9Y6J3 95 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 NBEAL2Q6ZNJ1 2754 aa10.37□□□□□ -0.75
USB1-205ENST00000561743 A0A0G2JLM5 398 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 LOC100506127A0A0U1RQW1 187 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 MSGN1A6NI15 193 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 RBMXL2O75526 392 aaKnown RBP10.36□□□□□ -0.75
USB1-205ENST00000561743 SAA1P0DJI8 122 aaPredicted RBP10.36□□□□□ -0.75
USB1-205ENST00000561743 GP9P14770 177 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 CD36P16671 472 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 SCAND1P57086 179 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 NEDD8Q15843 81 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 TNXAQ16473 311 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 KCTD21Q4G0X4 260 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 KCTD9Q7L273 389 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 OVCH2Q7RTZ1 564 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 OR6Q1Q8NGQ2 317 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 SRSF12Q8WXF0 261 aaKnown RBP10.36□□□□□ -0.75
USB1-205ENST00000561743 PHB2Q99623 299 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 ASCL2Q99929 193 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 RANGRFQ9HD47 186 aaPredicted RBP10.36□□□□□ -0.75
USB1-205ENST00000561743 RBMX2Q9Y388 322 aaKnown RBP10.36□□□□□ -0.75
USB1-205ENST00000561743 ETV7Q9Y603 341 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 U3KQK5 164 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 STAB2Q8WWQ8 2551 aa10.36□□□□□ -0.75
USB1-205ENST00000561743 ANKRD34BA5PLL1 514 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 FCGR3BO75015 233 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 TUSC2O75896 110 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 ZP3P21754 424 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 AADACP22760 399 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 RPL30P62888 115 aaKnown RBP10.35□□□□□ -0.75
USB1-205ENST00000561743 EIF4EBP1Q13541 118 aaPredicted RBP10.35□□□□□ -0.75
USB1-205ENST00000561743 DYRK1AQ13627 763 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 OR2B11Q5JQS5 317 aa10.35□□□□□ -0.75
USB1-205ENST00000561743 IDNKQ5T6J7 187 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms