RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SSBP3Q9BWW4 388 aaPredicted RBP11.29□□□□□ -0.6
TPM1-215ENST00000558868 BARX1Q9HBU1 254 aaPredicted RBP11.29□□□□□ -0.6
TPM1-215ENST00000558868 FLNCQ14315 2725 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 LOC105371242A0A075B767 164 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 MSGN1A6NI15 193 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 SSSCA1O60232 199 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 LY86O95711 162 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 APOA2P02652 100 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 P0C879 139 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 RNF224P0DH78 156 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 TPT1P13693 172 aaKnown RBP11.28□□□□□ -0.6
TPM1-215ENST00000558868 G6PCP35575 357 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 BRWD1-AS2P59051 145 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 ERVFRD-1P60508 538 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 POLR2GP62487 172 aaKnown RBP eCLIP11.28□□□□□ -0.6
TPM1-215ENST00000558868 ABHD12Q8N2K0 398 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 OR2C3Q8N628 320 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 DMBX1Q8NFW5 382 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 STOML3Q8TAV4 291 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 SCARB1Q8WTV0 552 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 IGFBPL1Q8WX77 278 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 ST8SIA2Q92186 375 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 C11orf1Q9H5F2 150 aa11.28□□□□□ -0.6
TPM1-215ENST00000558868 MARCH11A6NNE9 402 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 M0R1W7 72 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 KCNAB3O43448 404 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 SYNGR2O43760 224 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 CHST1O43916 411 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 SPDEFO95238 335 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 HRASP01112 189 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 HTR2BP41595 481 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 ZNF137PP52743 207 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 TAS2R30P59541 319 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 Q6ZRM9 215 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 OR8H3Q8N146 312 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 MAGT1Q9H0U3 335 aa11.27□□□□□ -0.61
TPM1-215ENST00000558868 LYRM2Q9NU23 88 aaPredicted RBP11.27□□□□□ -0.61
TPM1-215ENST00000558868 AMMECR1Q9Y4X0 333 aaPredicted RBP11.27□□□□□ -0.61
TPM1-215ENST00000558868 YLPM1P49750 1951 aaKnown RBP11.27□□□□□ -0.61
TPM1-215ENST00000558868 POLQO75417 2590 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 NDUFS7O75251 213 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 JTBO76095 146 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 CFDP00746 253 aaPredicted RBP11.26□□□□□ -0.61
TPM1-215ENST00000558868 GAPDHP04406 335 aaKnown RBP11.26□□□□□ -0.61
TPM1-215ENST00000558868 CAV2P51636 162 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 BAXQ07812 192 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 UTF1Q5T230 341 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 SP5Q6BEB4 398 aaPredicted RBP11.26□□□□□ -0.61
TPM1-215ENST00000558868 HIST2H2BCQ6DN03 193 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 EIF5AL1Q6IS14 154 aaKnown RBP11.26□□□□□ -0.61
TPM1-215ENST00000558868 C11orf42Q8N5U0 333 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 KIR3DL3Q8N743 410 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 ZNF383Q8NA42 475 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 BEND2Q8NDZ0 799 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 OR13D1Q8NGV5 346 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 CIB3Q96Q77 187 aaPredicted RBP11.26□□□□□ -0.61
TPM1-215ENST00000558868 PCGF1Q9BSM1 259 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 CLEC7AQ9BXN2 247 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 GSX2Q9BZM3 304 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 SLC35D1Q9NTN3 355 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 ONECUT1Q9UBC0 465 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 HSPB7Q9UBY9 170 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 WSB1Q9Y6I7 421 aa11.26□□□□□ -0.61
TPM1-215ENST00000558868 IGHV2-26A0A0B4J1V2 119 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 KIAA1324LA8MWY0 1029 aaPredicted RBP11.25□□□□□ -0.61
TPM1-215ENST00000558868 NDUFS8O00217 210 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 ENSAO43768 121 aaKnown RBP11.25□□□□□ -0.61
TPM1-215ENST00000558868 RBMXL2O75526 392 aaKnown RBP11.25□□□□□ -0.61
TPM1-215ENST00000558868 IGHV2-5P01817 119 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 CT45A6P0DMU7 189 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 CT45A5P0DMU8 189 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 CT45A7P0DMV0 189 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 LINC00205P59089 165 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 TNFRSF9Q07011 255 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 IZUMO4Q1ZYL8 232 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 MIDNQ504T8 468 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 CLLU1Q5K131 121 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 C1orf122Q6ZSJ8 110 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 BAP18Q8IXM2 172 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 OR4A16Q8NH70 328 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 SMIM8Q96KF7 97 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
TPM1-215ENST00000558868 ZFHX3Q15911 3703 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 C22orf46C9J442 243 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 TXNL1O43396 289 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 SCAF4O95104 1147 aaKnown RBP11.24□□□□□ -0.61
TPM1-215ENST00000558868 CRYZL1O95825 349 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 IGHV4-39P01824 125 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 MC5RP33032 325 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 RAB13P51153 203 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 UBE2KP61086 200 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 EWSR1Q01844 656 aaKnown RBP eCLIP11.24□□□□□ -0.61
TPM1-215ENST00000558868 POU2AF1Q16633 256 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 AARDQ4LEZ3 155 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 ALKAL2Q6UX46 152 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 C1orf229Q6ZS94 237 aaPredicted RBP11.24□□□□□ -0.61
TPM1-215ENST00000558868 STX12Q86Y82 276 aa11.24□□□□□ -0.61
TPM1-215ENST00000558868 TGIF2LXQ8IUE1 241 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms