RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 MED10Q9BTT4 135 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 METTL9Q9H1A3 318 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 CYSTM1Q9H1C7 97 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 IL20Q9NYY1 176 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 HDGFL3Q9Y3E1 203 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 THSD7AQ9UPZ6 1657 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 FBN2P35556 2912 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 MICAL3Q7RTP6 2002 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 AHNAK2Q8IVF2 5795 aa0.74□□□□□ -2.29
SUPT16H-206ENST00000556309 BRWD1Q9NSI6 2320 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 PIK3R4Q99570 1358 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 TRAV8-1A0A0A6YYK1 113 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 DAPL1A0PJW8 107 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 CETN3O15182 167 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 KLRC4O43908 158 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 NDUFB2O95178 105 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 CXCL2P19875 107 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 F8A1P23610 371 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 KDELR2P33947 212 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 RPL27AP46776 148 aaKnown RBP0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 AQP4P55087 323 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 MAP3K7CLP57077 242 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 TMEM33P57088 247 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 HPCAP84074 193 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 C4orf26Q17RF5 130 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 UNQ6190/PRO20217Q6UXQ8 127 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 FP248Q71RG6 208 aaPredicted RBP0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 IQCF2Q8IXL9 164 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 RIBC1Q8N443 379 aaPredicted RBP0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 SPERTQ8NA61 448 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 C15orf53Q8NAA6 179 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 OR1L8Q8NGR8 309 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 OR13C8Q8NGS7 320 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 ITFG2Q969R8 447 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 MROQ9BYG7 248 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 NRBP2Q9NSY0 501 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 PARVAQ9NVD7 372 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 EMC3Q9P0I2 261 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 POLEQ07864 2286 aa0.73□□□□□ -2.29
SUPT16H-206ENST00000556309 GREB1Q4ZG55 1949 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 ARFGEF3Q5TH69 2177 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 EIF4G1Q04637 1599 aaKnown RBP0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 SMIM23A6NLE4 172 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 GOLGA6L19H0YKK7 550 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 AZIN1O14977 448 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 SULT1B1O43704 296 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 TPM3P06753 285 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CXCL3P19876 107 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 AKR1C3P42330 323 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CD151P48509 253 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CTAG1AP78358 180 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 BTN3A2P78410 334 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 DMTNQ08495 405 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 GNA13Q14344 377 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CDK5R1Q15078 307 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 C8orf74Q6P047 294 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 ZNF705AQ6ZN79 300 aaPredicted RBP0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 SLC36A1Q7Z2H8 476 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 SPATA24Q86W54 205 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 STOML3Q8TAV4 291 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 DOHHQ9BU89 302 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CHMP4BQ9H444 224 aaKnown RBP0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CST9LQ9H4G1 147 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 CHMP5Q9NZZ3 219 aa0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 RBM7Q9Y580 266 aaKnown RBP0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 DICER1Q9UPY3 1922 aaKnown RBP0.72□□□□□ -2.29
SUPT16H-206ENST00000556309 TENM3Q9P273 2699 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 IGKV3-7A0A075B6H7 116 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 A0A087WUU8 490 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ERICH2A1L162 156 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 HMSDA8MTL9 139 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ZNF879B4DU55 563 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 M0QX08 132 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 CIAO1O76071 339 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ATP6V1G2O95670 118 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 S100A6P06703 90 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 LINC00614P0C842 121 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ETV1P50549 477 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 TBPL1P62380 186 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 TPM4P67936 248 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 HOXC5Q00444 222 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 SURF2Q15527 256 aaPredicted RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 USF2Q15853 346 aaPredicted RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 MOGQ16653 247 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 DNAL1Q4LDG9 190 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 SAPCD1Q5SSQ6 148 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 FAM45BPQ6NSW5 357 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 C7orf65Q6ZTY9 151 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 KRT222Q8N1A0 295 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 OR5AK3PQ8NH89 298 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ZNF675Q8TD23 568 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 DYDC1Q8WWB3 177 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 C12orf43Q96C57 262 aaKnown RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 LRRC45Q96CN5 670 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 C19orf60Q96EN9 201 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 CPNE2Q96FN4 548 aaPredicted RBP0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 ARL5BQ96KC2 179 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 IMMP2LQ96T52 175 aa0.71□□□□□ -2.3
SUPT16H-206ENST00000556309 CCDC94Q9BW85 323 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms