RNA–Protein interactions for RNA: ENST00000556029.5

TMPO-212, Transcript of thymopoietin, human

TSL 1 (best) BASIC

Gene TMPO, Length 4,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMPO-212	ENST00000556029	PCGF1	Q9BSM1	259 aa		10.52	□□□□□ -0.73
TMPO-212	ENST00000556029	TUBD1	Q9UJT1	453 aa		10.52	□□□□□ -0.73
TMPO-212	ENST00000556029	LINC01387	J3KSC0	135 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	NDUFB3	O43676	98 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	COL8A1	P27658	744 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	COTL1	Q14019	142 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	TMEM252	Q8N6L7	170 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	OR2H1	Q9GZK4	316 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	AAMDC	Q9H7C9	122 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	TNFRSF19	Q9NS68	423 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	ZNF581	Q9P0T4	197 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	STARD10	Q9Y365	291 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	NDUFB4	O95168	129 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	S100A7	P31151	101 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	PPOX	P50336	477 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	PSG4	Q00888	419 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	IL15RA	Q13261	267 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	TMEM187	Q14656	261 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	ZNF343	Q6P1L6	599 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	ATOH7	Q8N100	152 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	OR8A1	Q8NGG7	326 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	RPE	Q96AT9	228 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	LOXL4	Q96JB6	756 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	TMEM56	Q96MV1	263 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	SF3B5	Q9BWJ5	86 aa	Known RBP	10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	ZNF552	Q9H707	407 aa	Predicted RBP	10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	ONECUT1	Q9UBC0	465 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	ABHD14B	Q96IU4	210 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	RBM14	Q96PK6	669 aa	Known RBP	10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	HSPB9	Q9BQS6	159 aa		10.51	□□□□□ -0.73
TMPO-212	ENST00000556029	FOXI3	A8MTJ6	420 aa	Predicted RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	SCT	P09683	121 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	P2RY1	P47900	373 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	HINT1	P49773	126 aa	Predicted RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	GABRA6	Q16445	453 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	TNXA	Q16473	311 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	VMA21	Q3ZAQ7	101 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	C5orf17	Q8NAS9	161 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	DDA1	Q9BW61	102 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	SH2D2A	Q9NP31	389 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	LYRM2	Q9NU23	88 aa	Predicted RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	CXorf65	A6NEN9	183 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	CD5	P06127	495 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	SEC11B	P0C7V7	166 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	MDH2	P40926	338 aa	Known RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	PNRC1	Q12796	327 aa	Predicted RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	ELOB	Q15370	118 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	RSPO1	Q2MKA7	263 aa	Predicted RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	RPEL1	Q2QD12	228 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	OR52M1	Q8NGK5	317 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	LOC389332	A0A1B0GUA5	103 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	HELT	A6NFD8	242 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	SOD3	P08294	240 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	SMIM17	P0DL12	118 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	PMEL	P40967	661 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	ZFP36L1	Q07352	338 aa	Known RBP	10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	FDCSP	Q8NFU4	85 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	OR4C12	Q96R67	309 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	IGHV3OR15-7	A0A075B7D8	119 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	LRRC3C	A6NJW4	275 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	TRDC	B7Z8K6	153 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029		C9JQL5	133 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	CIDEA	O60543	219 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	UQCRFS1	P47985	274 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	DTX1	Q86Y01	620 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	OR1L6	Q8NGR2	347 aa		10.5	□□□□□ -0.73
TMPO-212	ENST00000556029	PRUNE2	Q8WUY3	3088 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	IGLV3-1	P01715	115 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	ZIC4	Q8N9L1	334 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	EAF1	Q96JC9	268 aa	Predicted RBP	10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	SH3BGRL3	Q9H299	93 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	OTOGL	Q3ZCN5	2332 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	IGKV1-27	A0A075B6S5	117 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	IGHV3-72	A0A0B4J1Y9	119 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	MOB1B	Q7L9L4	216 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	SSX8	Q7RTT4	187 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	C16orf82	Q7Z2V1	217 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	CPEB3	Q8NE35	698 aa	Known RBP	10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	MARS2	Q96GW9	593 aa	Known RBP	10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	GSX1	Q9H4S2	264 aa	Predicted RBP	10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	OR6C3	Q9NZP0	311 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	CACFD1	Q9UGQ2	172 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	PITPNC1	Q9UKF7	332 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	DIRC3	C9JPN6	131 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029		H3BTX0	84 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	SYNGR3	O43761	229 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	ORM1	P02763	201 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	LRRC10	Q5BKY1	277 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	SCGB1D4	Q6XE38	83 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	MRGPRG	Q86SM5	289 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	FAM216A	Q8WUB2	273 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	LIME1	Q9H400	295 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	CBLN4	Q9NTU7	201 aa		10.49	□□□□□ -0.73
TMPO-212	ENST00000556029	GRIFIN	A4D1Z8	144 aa		10.48	□□□□□ -0.73
TMPO-212	ENST00000556029	RHBDL1	O75783	438 aa		10.48	□□□□□ -0.73
TMPO-212	ENST00000556029	DANCR	P0C864	163 aa		10.48	□□□□□ -0.73
TMPO-212	ENST00000556029	NHLRC2	Q8NBF2	726 aa		10.48	□□□□□ -0.73
TMPO-212	ENST00000556029	OR4F17	Q8NGA8	305 aa		10.48	□□□□□ -0.73
TMPO-212	ENST00000556029	FAM222B	Q8WU58	562 aa		10.48	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms