RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 TOMM5Q8N4H5 51 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 OR2C3Q8N628 320 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 OR6F1Q8NGZ6 308 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 CT45A3Q8NHU0 189 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 MAFIPQ8WZ33 124 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 LHX4Q969G2 390 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 MALSU1Q96EH3 234 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 TSC22D3Q99576 134 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 SDHCQ99643 169 aaPredicted RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 PRRT1Q99946 306 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 C7orf50Q9BRJ6 194 aaKnown RBP4.63□□□□□ -1.67
SCAF11-213ENST00000550629 AGMATQ9BSE5 352 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 ABHD14AQ9BUJ0 271 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 MMP28Q9H239 520 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 IFI27L2Q9H2X8 130 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 PALMDQ9NP74 551 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 SIRT7Q9NRC8 400 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 SLC2A8Q9NY64 477 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 RDH8Q9NYR8 311 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 EHFQ9NZC4 300 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 OR1A1Q9P1Q5 309 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 DPM3Q9P2X0 92 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF69Q9UC07 566 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 GAB2Q9UQC2 676 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 VPS13CQ709C8 3753 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 ACANP16112 2415 aa4.63□□□□□ -1.67
SCAF11-213ENST00000550629 TRAV40A0A0B4J280 105 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 FAM172BPA6NC97 362 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 CENPXA8MT69 81 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 VGLL3A8MV65 326 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 DISC1C4P0D8 188 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 BUB1B-PAK6H3BSN5 160 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 RAB29O14966 203 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 LANCL1O43813 399 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 UPK1BO75841 260 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 TOMM40O96008 361 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 PPYP01298 95 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 PMP2P02689 132 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 ARG1P05089 322 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 FCER2P06734 321 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 COX7A1P24310 79 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 FCGR2CP31995 323 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 SAA4P35542 130 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 SRP14P37108 136 aaKnown RBP4.62□□□□□ -1.67
SCAF11-213ENST00000550629 RFX2P48378 723 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 DYNLT3P51808 116 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 LUMP51884 338 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-213ENST00000550629 HERV-K104P61576 105 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 TSPAN5P62079 268 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 ASAH1Q13510 395 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 BAK1Q16611 211 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 LTC4SQ16873 150 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 HLA-DRB5Q30154 266 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 OR10V1Q8NGI7 309 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 OR4P4Q8NGL7 312 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 OR10X1Q8NGY0 326 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 TERB2Q8NHR7 220 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 UBALD1Q8TB05 177 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 NPIPB3Q92617 1050 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 ST6GALNAC6Q969X2 333 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 MOB3AQ96BX8 217 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF486Q96H40 463 aaPredicted RBP4.62□□□□□ -1.67
SCAF11-213ENST00000550629 S1PR3Q99500 378 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 SMR3AQ99954 134 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 BEX2Q9BXY8 128 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 MSRB1Q9NZV6 116 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 PIPOXQ9P0Z9 390 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 SCP2D1Q9UJQ7 156 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF221Q9UK13 617 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 FAM96BQ9Y3D0 163 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 TLN2Q9Y4G6 2542 aa4.62□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV3-43A0A0B4J1X8 118 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 IGLV5-39A0A0G2JS06 123 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 CRLF1O75462 422 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 GAPDHP04406 335 aaKnown RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 FBP1P09467 338 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 OR8U9P0C7N5 309 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF735P0CB33 412 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV3-43DP0DP04 118 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 IGHV4-38-2P0DP08 117 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 AADACP22760 399 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 NFYAP23511 347 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 S100GP29377 79 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 GPR12P47775 334 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 GNG10P50151 68 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 DEFA1P59665 94 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 DEFA3P59666 94 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF816Q0VGE8 651 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 KLRD1Q13241 179 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ANXA2RQ3ZCQ2 193 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 UTF1Q5T230 341 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 TPTE2P1Q5T6R2 138 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 AADACL3Q5VUY0 350 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF57Q68EA5 555 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-213ENST00000550629 MZT2BQ6NZ67 158 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 ZNF833PQ6ZTB9 187 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 LHFPL1Q86WI0 220 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 CMTM1Q8IZ96 169 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 SLC38A6Q8IZM9 456 aa4.61□□□□□ -1.67
SCAF11-213ENST00000550629 OR8H3Q8N146 312 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms