RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 RANGRFQ9HD47 186 aaPredicted RBP7.24□□□□□ -1.25
YBX3-218ENST00000546298 ZNF230Q9UIE0 474 aaPredicted RBP7.24□□□□□ -1.25
YBX3-218ENST00000546298 STUB1Q9UNE7 303 aa7.24□□□□□ -1.25
YBX3-218ENST00000546298 SSR3Q9UNL2 185 aa7.24□□□□□ -1.25
YBX3-218ENST00000546298 SMAD5-AS1Q9Y6J3 95 aa7.24□□□□□ -1.25
YBX3-218ENST00000546298 IGHV4OR15-8A0A075B7B6 117 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 A0A087WW49 117 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 A0A0B4J203 849 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 CREBL2O60519 120 aaPredicted RBP7.23□□□□□ -1.25
YBX3-218ENST00000546298 BRI3O95415 125 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 ATP6V1G2O95670 118 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 IGLV2-23P01705 113 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 CRYGBP07316 175 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 AADACP22760 399 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 SLURP1P55000 103 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 HACD4Q5VWC8 232 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 ACSM6Q6P461 480 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 TEX45Q8NA69 505 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 OR5T1Q8NG75 326 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 CASTOR1Q8WTX7 329 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 MAFIPQ8WZ33 124 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 ST6GALNAC5Q9BVH7 336 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 TPSG1Q9NRR2 321 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 TXNL4BQ9NX01 149 aaKnown RBP7.23□□□□□ -1.25
YBX3-218ENST00000546298 PRELID3BQ9Y3B1 194 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 U3KQK5 164 aa7.23□□□□□ -1.25
YBX3-218ENST00000546298 ACTL6BO94805 426 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 CD36P16671 472 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 DUTP33316 252 aaKnown RBP7.22□□□□□ -1.25
YBX3-218ENST00000546298 GNG2P59768 71 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 UBE2KP61086 200 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 TATDN3Q17R31 274 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 CNIH2Q6PI25 160 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 NR2C2APQ86WQ0 139 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 OSR1Q8TAX0 266 aaPredicted RBP7.22□□□□□ -1.25
YBX3-218ENST00000546298 USMG5Q96IX5 58 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 PHB2Q99623 299 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 DAPK2Q9UIK4 370 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 MRPS7Q9Y2R9 242 aaKnown RBP7.22□□□□□ -1.25
YBX3-218ENST00000546298 RRP15Q9Y3B9 282 aaKnown RBP7.22□□□□□ -1.25
YBX3-218ENST00000546298 OR2W1Q9Y3N9 320 aa7.22□□□□□ -1.25
YBX3-218ENST00000546298 SMIM30A4D0T7 59 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 MPPED1O15442 326 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 CRYZL1O95825 349 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 SPNP16150 400 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 SCAND1P57086 179 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 PJVKQ0ZLH3 352 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 TNXAQ16473 311 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 PRSS8Q16651 343 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 SFXN4Q6P4A7 337 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 ZNF773Q6PK81 442 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 ZNF645Q8N7E2 425 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 DDB2Q92466 427 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 C5orf30Q96GV9 206 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 DCUN1D5Q9BTE7 237 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 TINAGL1Q9GZM7 467 aaPredicted RBP7.21□□□□□ -1.26
YBX3-218ENST00000546298 COA4Q9NYJ1 87 aa7.21□□□□□ -1.26
YBX3-218ENST00000546298 IGKV1D-8A0A087WSZ0 117 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 MSGN1A6NI15 193 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 SRRM4A7MD48 611 aaKnown RBP7.2□□□□□ -1.26
YBX3-218ENST00000546298 J3QRK9 145 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 TMEM127O75204 238 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 HLA-DQB1P01920 261 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 OR9G9P0C7N8 305 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 SNRPBP14678 240 aaKnown RBP7.2□□□□□ -1.26
YBX3-218ENST00000546298 GP9P14770 177 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 CDK10Q15131 360 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 FAM209BQ5JX69 171 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 ANKRD13BQ86YJ7 626 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 MMD2Q8IY49 270 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 NUDCD2Q8WVJ2 157 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 HSD17B10Q99714 261 aaKnown RBP7.2□□□□□ -1.26
YBX3-218ENST00000546298 SPIN2AQ99865 258 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 ASCL2Q99929 193 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 SPIN2BQ9BPZ2 258 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 RHBDL2Q9NX52 303 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 PEF1Q9UBV8 284 aaKnown RBP7.2□□□□□ -1.26
YBX3-218ENST00000546298 ANXA10Q9UJ72 324 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 RBMX2Q9Y388 322 aaKnown RBP7.2□□□□□ -1.26
YBX3-218ENST00000546298 ETV7Q9Y603 341 aa7.2□□□□□ -1.26
YBX3-218ENST00000546298 A0A0A6YYH2 397 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 ANKRD34BA5PLL1 514 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 TMEM235A6NFC5 223 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 A6NJ64 397 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 LINC00473A8K010 186 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 H0Y980 276 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 FCGR3BO75015 233 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 TUSC2O75896 110 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 NFYAP23511 347 aaPredicted RBP7.19□□□□□ -1.26
YBX3-218ENST00000546298 SDC2P34741 201 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 SSBP2P81877 361 aaPredicted RBP7.19□□□□□ -1.26
YBX3-218ENST00000546298 KLF5Q13887 457 aaPredicted RBP7.19□□□□□ -1.26
YBX3-218ENST00000546298 ZNF343Q6P1L6 599 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 KCTD9Q7L273 389 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 SLC25A42Q86VD7 318 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 OR4S2Q8NH73 311 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 VSTM2AQ8TAG5 236 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 LGALS14Q8TCE9 139 aa7.19□□□□□ -1.26
YBX3-218ENST00000546298 SRSF12Q8WXF0 261 aaKnown RBP7.19□□□□□ -1.26
YBX3-218ENST00000546298 ACOT12Q8WYK0 555 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms