RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 FRZBQ92765 325 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 Q96MT0 163 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 GPR22Q99680 433 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 RSG1Q9BU20 258 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 SFXN3Q9BWM7 321 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 PCBD2Q9H0N5 130 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 PRTFDC1Q9NRG1 225 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 SNX24Q9Y343 169 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 MMACHCQ9Y4U1 282 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 CHCHD2Q9Y6H1 151 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-207ENST00000544052 RTTNQ86VV8 2226 aa2.24□□□□□ -2.05
SCFD1-207ENST00000544052 CADP27708 2225 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 ANKRD20A5PA0PJZ0 165 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 FAM159BA6NKW6 160 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 SEC14L6B5MCN3 397 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 H7C2Y5 167 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 MANBAO00462 879 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 GPR171O14626 319 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 TAAR5O14804 337 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 EIF1BO60739 113 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 SHOX2O60902 331 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 IGHV3-11P01762 117 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 ZNF688P0C7X2 276 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 ZNF32P17041 273 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 CXCR1P25024 350 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 EIF1P41567 113 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 SLCO1A2P46721 670 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 AQP5P55064 265 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 C2orf54Q08AI8 447 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 EBPQ15125 230 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 COQ5Q5HYK3 327 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 RPS27LQ71UM5 84 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 ZCCHC24Q8N2G6 241 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 LRRC25Q8N386 305 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 OR2AE1Q8NHA4 323 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 SFXN5Q8TD22 340 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 PPWD1Q96BP3 646 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 L3HYPDHQ96EM0 354 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 TSNAXQ99598 290 aaKnown RBP2.23□□□□□ -2.05
SCFD1-207ENST00000544052 SMR3AQ99954 134 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 AIF1LQ9BQI0 150 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 OR8D2Q9GZM6 311 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 DERL2Q9GZP9 239 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 ASB4Q9Y574 426 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 USF3Q68DE3 2245 aa2.23□□□□□ -2.05
SCFD1-207ENST00000544052 IGHV2OR16-5A0A0B4J2B6 119 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 J3QLI3 93 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PSPHP1O15172 72 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PFDN6O15212 129 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 RBBP9O75884 186 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 UQCRHP07919 91 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 HIST1H1TP22492 207 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 RPL14P50914 215 aaKnown RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 TAS2R60P59551 318 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 SARNPP82979 210 aaKnown RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 DR1Q01658 176 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 NAB1Q13506 487 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 TEX30Q5JUR7 227 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 FAM71E1Q6IPT2 247 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 ZNF615Q8N8J6 731 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 OR4M1Q8NGD0 313 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 OR10Z1Q8NGY1 313 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 KCTD4Q8WVF5 259 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 CMTM5Q96DZ9 223 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 CIB1Q99828 191 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 KRTAP4-3Q9BYR4 195 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 POPDC3Q9HBV1 291 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 SDHAF2Q9NX18 166 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 EMC3Q9P0I2 261 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 OPN4Q9UHM6 478 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 KLF13Q9Y2Y9 288 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 LRRC42Q9Y546 428 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 WIF1Q9Y5W5 379 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 NIPBLQ6KC79 2804 aaeCLIP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 CSPG4Q6UVK1 2322 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 SVEP1Q4LDE5 3571 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 SONP18583 2426 aaKnown RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 TRAV8-4A0A0B4J246 113 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 IGHV7-4-1A0A0J9YVY3 117 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 FAM240AA0A1B0GVK7 77 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 CLDN34H7C241 214 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 J3QT63 122 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 ATP8B1O43520 1251 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 CCDC22O60826 627 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 STK16O75716 305 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 P01737 135 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 OCMP0CE72 109 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PET100P0DJ07 73 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PAX6P26367 422 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 MAGEA12P43365 314 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 CLDN12P56749 244 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 MTPNP58546 118 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 LINC00315P59091 139 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 ACTBP60709 375 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 ACTG1P63261 375 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PITPNAQ00169 270 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 PRKCDQ05655 676 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 GUSBP1Q15486 140 aa2.22□□□□□ -2.05
SCFD1-207ENST00000544052 NNATQ16517 81 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms