RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 SIGLECL1Q8N7X8 197 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 LRTM2Q8N967 370 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 CCDC71LQ8N9Z2 235 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 ADAD2Q8NCV1 583 aaKnown RBP4.69□□□□□ -1.66
ABCF1-207ENST00000542772 OR8H1Q8NGG4 311 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 OR4C13Q8NGP0 309 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 OSR1Q8TAX0 266 aaPredicted RBP4.69□□□□□ -1.66
ABCF1-207ENST00000542772 ZNF418Q8TF45 676 aaPredicted RBP4.69□□□□□ -1.66
ABCF1-207ENST00000542772 SSMEM1Q8WWF3 244 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 CAPSLQ8WWF8 208 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 ZDHHC16Q969W1 377 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 FLYWCH2Q96CP2 140 aaKnown RBP4.69□□□□□ -1.66
ABCF1-207ENST00000542772 TMEM56Q96MV1 263 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 GPHA2Q96T91 129 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 AIFM2Q9BRQ8 373 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 PLEKHA2Q9HB19 425 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 ESM1Q9NQ30 184 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 SLC35D1Q9NTN3 355 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 PITPNC1Q9UKF7 332 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 FLVCR2Q9UPI3 526 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 C14orf166Q9Y224 244 aaKnown RBP4.69□□□□□ -1.66
ABCF1-207ENST00000542772 TCF19Q9Y242 345 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 WASHC3Q9Y3C0 194 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 NUBP2Q9Y5Y2 271 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 TMEM56-RWDD3S4R434 201 aa4.69□□□□□ -1.66
ABCF1-207ENST00000542772 IGHV3-72A0A0B4J1Y9 119 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 A0A0B4J2A0 478 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 C9orf170A2RU37 121 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 H0Y980 276 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 H3BUX3 64 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TNFSF12O43508 249 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 RAMP3O60896 148 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 FCGR3BO75015 233 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 OR2F2O95006 317 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 SFT2D2O95562 160 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IGKV1D-33P01593 117 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IGKV1-33P01594 117 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IGKV1-39P01597 117 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IGHV4-59P01825 116 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 APOA2P02652 100 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IGKV1-16P04430 117 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IGKV1D-39P04432 117 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 AMY1AP04745 511 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 RLN1P04808 185 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 FGF2P09038 288 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 OR4E1P0C645 316 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 VSIG10L2P0DP72 767 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 CD24P25063 80 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 LPAR6P43657 344 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TAS2R31P59538 309 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TMEM187Q14656 261 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 OXA1LQ15070 435 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 MRGPRG-AS1Q2M3A8 158 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 ABCA11PQ4W5N1 156 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 PHLDA2Q53GA4 152 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 FBLN7Q53RD9 439 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 C11orf88Q6PI97 169 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 RBMS3Q6XE24 437 aaKnown RBP4.68□□□□□ -1.66
ABCF1-207ENST00000542772 SPAG16Q8N0X2 631 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 PUSL1Q8N0Z8 303 aaKnown RBP4.68□□□□□ -1.66
ABCF1-207ENST00000542772 CENPSQ8N2Z9 138 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 FAM71E2Q8N5Q1 922 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 Q8N9W7 124 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TEX45Q8NA69 505 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TCTEX1D2Q8WW35 142 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 IL22RA2Q969J5 263 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 SEC22AQ96IW7 307 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 JMJD8Q96S16 334 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TP53RKQ96S44 253 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 TMEM222Q9H0R3 208 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 NAA60Q9H7X0 242 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 C1RLQ9NZP8 487 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 SHPKQ9UHJ6 478 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 VPREB3Q9UKI3 123 aa4.68□□□□□ -1.66
ABCF1-207ENST00000542772 SONP18583 2426 aaKnown RBP4.68□□□□□ -1.66
ABCF1-207ENST00000542772 PIGBOS1A0A0B4J2F0 54 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 DBX1A6NMT0 343 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 INMT-MINDY4F8WBC2 141 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 H7C2Y5 167 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 M0QZK8 103 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 RRHO14718 337 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 ARPC1BO15143 372 aaKnown RBP4.67□□□□□ -1.66
ABCF1-207ENST00000542772 TCF21O43680 179 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 PEX14O75381 377 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 TSPAN9O75954 239 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 SPDEFO95238 335 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 DUS4LO95620 317 aaKnown RBP4.67□□□□□ -1.66
ABCF1-207ENST00000542772 HRASP01112 189 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 IFNA2P01563 188 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 RNASE1P07998 156 aaKnown RBP4.67□□□□□ -1.66
ABCF1-207ENST00000542772 OR5AC1P0C628 307 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 P0C879 139 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 NQO2P16083 231 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 SPNP16150 400 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 AKR1C4P17516 323 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 HLA-GP17693 338 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 ANXA7P20073 488 aaKnown RBP4.67□□□□□ -1.66
ABCF1-207ENST00000542772 CNTFRP26992 372 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 UBE2KP61086 200 aa4.67□□□□□ -1.66
ABCF1-207ENST00000542772 RPS16P62249 146 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms