RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 AKR1C2P52895 323 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 SNU13P55769 128 aaKnown RBP4.85□□□□□ -1.63
CPSF7-219ENST00000539952 UCP3P55916 312 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 TMEM50BP56557 158 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 AKR1C1Q04828 323 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 CD69Q07108 199 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 MZT1Q08AG7 82 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 HABP2Q14520 560 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-219ENST00000539952 GNMTQ14749 295 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 RSU1Q15404 277 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 OR8B8Q15620 311 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 IAH1Q2TAA2 248 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-219ENST00000539952 NSUN5P1Q3KNT7 163 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 DHRS11Q6UWP2 260 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 DPPA3Q6W0C5 159 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 Q6ZRG5 221 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 Q6ZSR3 168 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 VMO1Q7Z5L0 202 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 FAM185AQ8N0U4 392 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 KLHDC1Q8N7A1 406 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 LINC00469Q8N7U9 141 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 CCDC71LQ8N9Z2 235 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 LY6G5BQ8NDX9 201 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 BEND2Q8NDZ0 799 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 GJC3Q8NFK1 279 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 OR51A2Q8NGJ7 313 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 OR51T1Q8NGJ9 327 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 OR13D1Q8NGV5 346 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 HIST1H2BAQ96A08 127 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 TMEM230Q96A57 120 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 RRNAD1Q96FB5 475 aaKnown RBP4.85□□□□□ -1.63
CPSF7-219ENST00000539952 GALNT14Q96FL9 552 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 OR10C1Q96KK4 312 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 SSX3Q99909 188 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 B9D2Q9BPU9 175 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 EIF5A2Q9GZV4 153 aaKnown RBP4.85□□□□□ -1.63
CPSF7-219ENST00000539952 SLC25A31Q9H0C2 315 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 MEGF9Q9H1U4 602 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 NIT2Q9NQR4 276 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 GSN-AS1Q9NRJ2 163 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 EHFQ9NZC4 300 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 OR5AC2Q9NZP5 309 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 GSKIPQ9P0R6 139 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 CTSZQ9UBR2 303 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 RPUSD1Q9UJJ7 312 aaKnown RBP4.85□□□□□ -1.63
CPSF7-219ENST00000539952 DMRT1Q9Y5R6 373 aa4.85□□□□□ -1.63
CPSF7-219ENST00000539952 IGHV3-64DA0A0J9YX35 117 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 DUXBA0A1W2PPF3 345 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 CRYM-AS1A6NIL9 109 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 H3BSH0 61 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 NPFFO15130 113 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 CRTAPO75718 401 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 PTBP3O95758 552 aaKnown RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 HBE1P02100 147 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 MBPP02686 304 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 HOXB5P09067 269 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 ZNF44P15621 663 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 IGLL1P15814 213 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 HOXA5P20719 270 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 DTYMKP23919 212 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 DUSP1P28562 367 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 S100A2P29034 98 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 BLVRBP30043 206 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 LPAR6P43657 344 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 S100A10P60903 97 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 SUPT4H1P63272 117 aaKnown RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 COL10A1Q03692 680 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 FABP9Q0Z7S8 132 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 MALLQ13021 153 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 RBM39Q14498 530 aaKnown RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 ZNF266Q14584 549 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 CLINT1Q14677 625 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 ANKRD55Q3KP44 614 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 AADACL3Q5VUY0 350 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 RPL7L1Q6DKI1 246 aaKnown RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 COLCA1Q6ZS62 124 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 LGI3Q8N145 548 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 BOLLQ8N9W6 283 aaKnown RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 OR13C9Q8NGT0 318 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 PPP1R35Q8TAP8 253 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 ADAT3Q96EY9 351 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-219ENST00000539952 AKR1E2Q96JD6 320 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 SPIN2AQ99865 258 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 SPIN2BQ9BPZ2 258 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 PECRQ9BY49 303 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 NPFFR1Q9GZQ6 430 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 METTL9Q9H1A3 318 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 HIPK2Q9H2X6 1198 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 KCNK15Q9H427 330 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 UFSP2Q9NUQ7 469 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 ZNF391Q9UJN7 358 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 POLR1DQ9Y2S0 133 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 SIGLEC9Q9Y336 463 aa4.84□□□□□ -1.63
CPSF7-219ENST00000539952 ZNF729A6NN14 1252 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-219ENST00000539952 FOXI3A8MTJ6 420 aaPredicted RBP4.83□□□□□ -1.64
CPSF7-219ENST00000539952 H3BUX3 64 aa4.83□□□□□ -1.64
CPSF7-219ENST00000539952 M0R036 132 aa4.83□□□□□ -1.64
CPSF7-219ENST00000539952 SOCS1O15524 211 aa4.83□□□□□ -1.64
CPSF7-219ENST00000539952 ST8SIA3O43173 380 aa4.83□□□□□ -1.64
CPSF7-219ENST00000539952 NDUFB3O43676 98 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms