RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 LRBAP50851 2863 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 DYSFO75923 2080 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 CACNA1BQ00975 2339 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 A0A087X0M5 115 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 IGKV1D-13A0A0B4J2D9 117 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 A0A1B0GX30 115 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 TMEM30CPA0ZSE6 113 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZG16O60844 167 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZNF737O75373 536 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 TUSC2O75896 110 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 IGKV1-13P0DP09 117 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 DYNLT3P51808 116 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 PKIAP61925 76 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 ICAM4Q14773 271 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 SSX2Q16385 188 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 KHDC3LQ587J8 217 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 SP5Q6BEB4 398 aaPredicted RBP14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 MOB1BQ7L9L4 216 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 FAM90A1Q86YD7 464 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 ABHD14BQ96IU4 210 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 CISD1Q9NZ45 108 aaKnown RBP14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 OR1A1Q9P1Q5 309 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 RNF115Q9Y4L5 304 aa14.22□□□□□ -0.13
PCDHB17P-201ENST00000539533 CST7O76096 145 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 SCAF4O95104 1147 aaKnown RBP14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 ADH4P08319 380 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 APOBEC3AP31941 199 aaPredicted RBP14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 GLIPR1P48060 266 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 DLK1P80370 383 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 ELOBQ15370 118 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 SLC35E4Q6ICL7 350 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZNF429Q86V71 674 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 ODF3L1Q8IXM7 274 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 HIST3H2BBQ8N257 126 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 CYB561D1Q8N8Q1 229 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 ZNRF1Q8ND25 227 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 OR10J5Q8NHC4 309 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 GNPNAT1Q96EK6 184 aaPredicted RBP14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 SSX3Q99909 188 aa14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 SPTBN1Q01082 2364 aaKnown RBP14.21□□□□□ -0.13
PCDHB17P-201ENST00000539533 TSTD3H0UI37 97 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 HSPB1P04792 205 aaKnown RBP14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 CD55P08174 381 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 EPHA1P21709 976 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 ZNF506Q5JVG8 444 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 DEFB108BQ8NET1 73 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 Q8TCH9 128 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 DIRC2Q96SL1 478 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 CABLES2Q9BTV7 478 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 HCFC1P51610 2035 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 TGIF2-C20orf24A0A0A6YYL0 155 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 TMEM50AO95807 157 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 IFNA10P01566 189 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 TNFRSF1AP19438 455 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 RUNX1Q01196 453 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 C4orf17Q53FE4 359 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 ZNF818PQ6ZRF7 136 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 TMEM217Q8N7C4 229 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 WSB1Q9Y6I7 421 aa14.2□□□□□ -0.14
PCDHB17P-201ENST00000539533 DEFB108AA8MXU0 73 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 FABP4P15090 132 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 BTF3P20290 206 aaKnown RBP14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 BAXQ07812 192 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 EDDM3AQ14507 147 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 NMSQ5H8A3 153 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 AKR1C8PQ5T2L2 129 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 GPHA2Q96T91 129 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 DSCAMO60469 2012 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 ELOA3CA0A087WX78 387 aaPredicted RBP14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 CLEC18AA5D8T8 446 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 C12orf77C9JDV5 145 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 CYB5BO43169 146 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 TRGC2P03986 189 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 ERVFRD-1P60508 538 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 ID3Q02535 119 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 H1FOOQ8IZA3 346 aaPredicted RBP14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 CLEC18CQ8NCF0 446 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 MRGPRDQ8TDS7 321 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 FAM222BQ8WU58 562 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 TVP23CQ96ET8 276 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 NIPSNAP3BQ9BS92 247 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 DCTN5Q9BTE1 182 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 SAP30LQ9HAJ7 183 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 DYNLRB1Q9NP97 96 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 ABCA4P78363 2273 aa14.19□□□□□ -0.14
PCDHB17P-201ENST00000539533 LOXP28300 417 aaPredicted RBP14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 TESK1Q15569 626 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 DUX4L9Q6RFH8 374 aaPredicted RBP14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 OR1L1Q8NH94 360 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 CLDND2Q8NHS1 167 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 RBMXL1Q96E39 390 aaKnown RBP14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 SIRT7Q9NRC8 400 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 CCL28Q9NRJ3 127 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 OR2W1Q9Y3N9 320 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 DUXBA0A1W2PPF3 345 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 IRF2P14316 349 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 MMP9P14780 707 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 TLE4Q04727 773 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 DNLZQ5SXM8 178 aa14.18□□□□□ -0.14
PCDHB17P-201ENST00000539533 FAM53AQ6NSI3 398 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms