RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 ST6GALNAC6Q969X2 333 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 CCL13Q99616 98 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 KLF4O43474 513 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 HKR1P10072 659 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 HILPDAQ9Y5L2 63 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 STRCQ7RTU9 1775 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 RP1L1Q8IWN7 2480 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-208ENST00000538570 DPRXA6NFQ7 191 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 SRIP30626 198 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 SSTR5P35346 364 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 MEF2CQ06413 473 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-208ENST00000538570 GTF3AQ92664 365 aaKnown RBP8.58□□□□□ -1.04
COL4A6-208ENST00000538570 TAF15Q92804 592 aaKnown RBP eCLIP8.58□□□□□ -1.04
COL4A6-208ENST00000538570 PRSS27Q9BQR3 290 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 G6PC2Q9NQR9 355 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 PHLDA3Q9Y5J5 127 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 DOCK2Q92608 1830 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 ANOS1P23352 680 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 PSG4Q00888 419 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 EDA2RQ9HAV5 297 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 IGKV3D-15A0A087WSY6 115 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 CGB1A6NKQ9 187 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 UPK3AO75631 287 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 OR2H2O95918 312 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 CD160O95971 181 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 IGKV3-15P01624 115 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 AGAP20933 346 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 UCP2P55851 309 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 RPL8P62917 257 aaKnown RBP8.58□□□□□ -1.04
COL4A6-208ENST00000538570 TPRX1Q8N7U7 411 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 DDB2Q92466 427 aa8.58□□□□□ -1.04
COL4A6-208ENST00000538570 SIRT4Q9Y6E7 314 aaPredicted RBP8.58□□□□□ -1.04
COL4A6-208ENST00000538570 A0A1W2PRS3 328 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 SCTP09683 121 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 TMEM177Q53S58 311 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 DCAF10Q5QP82 559 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 OR4C13Q8NGP0 309 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 GALNT14Q96FL9 552 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 CISD1Q9NZ45 108 aaKnown RBP8.57□□□□□ -1.04
COL4A6-208ENST00000538570 ASAH2BP0C7U1 165 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 CX3CL1P78423 397 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 HCP5Q6MZN7 132 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 C10orf111Q8N326 155 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 C2orf88Q9BSF0 95 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 SIPA1L3O60292 1781 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-208ENST00000538570 C9orf172C9J069 976 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 CCL21O00585 134 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 PLAUP00749 431 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 TGFAP01135 160 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 ADRA2AP08913 450 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 GZMMP51124 257 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 RND3P61587 244 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 MMD2Q8IY49 270 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 KIAA1551Q9HCM1 1747 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 DTX4Q9Y2E6 619 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 PRSS2P07478 247 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 GPX4P36969 197 aaPredicted RBP8.57□□□□□ -1.04
COL4A6-208ENST00000538570 DLX6P56179 175 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 MIC13Q5XKP0 118 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 FAM71F2Q6NXP2 309 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 GLRX5Q86SX6 157 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 GPR132Q9UNW8 380 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 C17orf51A8MQB3 221 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 UBE2CO00762 179 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 CCL8P80075 99 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 FADS6Q8N9I5 356 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 C5orf30Q96GV9 206 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 C1orf43Q9BWL3 253 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 RTN4RQ9BZR6 473 aa8.57□□□□□ -1.04
COL4A6-208ENST00000538570 ARAP2Q8WZ64 1704 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 PGLYRP1O75594 196 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-208ENST00000538570 DXOO77932 396 aaKnown RBP8.56□□□□□ -1.04
COL4A6-208ENST00000538570 MPV17P39210 176 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 CARHSP1Q9Y2V2 147 aaKnown RBP8.56□□□□□ -1.04
COL4A6-208ENST00000538570 IGHV3-72A0A0B4J1Y9 119 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 PEBP1P30086 187 aaKnown RBP8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FCGR2BP31994 310 aaPredicted RBP8.56□□□□□ -1.04
COL4A6-208ENST00000538570 KIAA1644Q3SXP7 199 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 Q5BKY6 102 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 RFLNBQ8N5W9 214 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 CDK5RAP2Q96SN8 1893 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 TRAV30A0A087WSZ9 112 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 A8MXK9 166 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 PPP1R17O96001 155 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 C1orf53Q5VUE5 145 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 ATRAIDQ6UW56 229 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 IGHV3OR16-12A0A075B7B8 117 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 TRBV5-5A0A0J9YX44 114 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A10PA6NDY2 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A18PA6NE21 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A16PA6NEW6 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A20PA6NIJ5 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A8PA6NJQ4 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A7PA6NKC0 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A22PA8MWA6 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A12PA8MX19 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A5PA8MXJ8 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 FAM90A23PA8MXZ1 464 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 SNAI2O43623 268 aa8.56□□□□□ -1.04
COL4A6-208ENST00000538570 IGKV1D-16P01601 117 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms