RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 PPP1R27Q86WC6 154 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 RFESDQ8TAC1 157 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 COQ2Q96H96 371 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 LINC00574Q9H8X3 128 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 PEF1Q9UBV8 284 aaKnown RBP6.84□□□□□ -1.31
USP28-205ENST00000537706 NUFIP1Q9UHK0 495 aaKnown RBP6.84□□□□□ -1.31
USP28-205ENST00000537706 ETV7Q9Y603 341 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 V9GY05 133 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 V9GYS6 101 aa6.84□□□□□ -1.31
USP28-205ENST00000537706 ZNF736B4DX44 427 aaPredicted RBP6.84□□□□□ -1.32
USP28-205ENST00000537706 NPIPB11E5RHQ5 1161 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 H3BUA1 57 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 SRSF10O75494 262 aaKnown RBP6.84□□□□□ -1.32
USP28-205ENST00000537706 IGLV3-1P01715 115 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 CGB3P0DN86 165 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 CGB7P0DN87 165 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 CALCBP10092 127 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 AADACP22760 399 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 EIF2B2P49770 351 aaKnown RBP6.84□□□□□ -1.32
USP28-205ENST00000537706 ACTBP60709 375 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 C19orf54Q5BKX5 351 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 DEGS2Q6QHC5 323 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 C8orf31Q8N9H6 132 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 SLC25A38Q96DW6 304 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 MOB1AQ9H8S9 216 aa6.84□□□□□ -1.32
USP28-205ENST00000537706 CTDSPLO15194 276 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 GSTZ1O43708 216 aaPredicted RBP6.83□□□□□ -1.32
USP28-205ENST00000537706 KIR2DS2P43631 304 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 SOX2P48431 317 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 MFAP2P55001 183 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 AKIRIN2Q53H80 203 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 HES5Q5TA89 166 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 ZNF57Q68EA5 555 aaPredicted RBP6.83□□□□□ -1.32
USP28-205ENST00000537706 PLET1Q6UQ28 207 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 DUSP18Q8NEJ0 188 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 OR13A1Q8NGR1 328 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 ORAI1Q96D31 301 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 KIF25Q9UIL4 384 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 NUBP2Q9Y5Y2 271 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 R4GMQ9 66 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 HSPG2P98160 4391 aa6.83□□□□□ -1.32
USP28-205ENST00000537706 KIR2DL5BA0A0G2JN68 375 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 KIR2DL5BA0A0G2JPC4 375 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 FAM240BA0A1B0GVZ2 78 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 CTRB1P17538 263 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 RBP2P50120 134 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 Q3ZCU0 254 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 BCL2L15Q5TBC7 163 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 CTRB2Q6GPI1 263 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 KIR2DL5AQ8N109 375 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 OR51A4Q8NGJ6 313 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 OR52M1Q8NGK5 317 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 OR14K1Q8NGZ2 314 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 OR10AC1Q8NH08 325 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 SMIM4Q8WVI0 70 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 SNAPC3Q92966 411 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 ABHD1Q96SE0 405 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 RHOFQ9HBH0 211 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 TRAV8-7A0A075B6U6 113 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 A0A0B4J293 547 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 A6NIN4 97 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 J3QL48 77 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 SLC33A1O00400 549 aaPredicted RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 SDCBPO00560 298 aaPredicted RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 ISG15P05161 165 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 CD2P06729 351 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 UBCP0CG48 685 aaKnown RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 RBMY1CP0DJD4 496 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 PAN3Q58A45 887 aaKnown RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 C1orf134Q5TEV5 83 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 RSBN1Q5VWQ0 802 aaPredicted RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 PVRIGQ6DKI7 326 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 C7orf50Q9BRJ6 194 aaKnown RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 C11orf68Q9H3H3 251 aaKnown RBP6.82□□□□□ -1.32
USP28-205ENST00000537706 RAB9BQ9NP90 201 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 ZC4H2Q9NQZ6 224 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 CKLFQ9UBR5 152 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 STEAP1Q9UHE8 339 aa6.82□□□□□ -1.32
USP28-205ENST00000537706 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 DMBT1Q9UGM3 2413 aaPredicted RBP6.81□□□□□ -1.32
USP28-205ENST00000537706 LOC107986453A0A1B0GWG9 222 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 SULT1B1O43704 296 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 LANCL1O43813 399 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 ORC5O43913 435 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 CCNKO75909 580 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 GZMHP20718 246 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 KCNJ3P48549 501 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 CX3CL1P78423 397 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 MRPS10P82664 201 aaKnown RBP6.81□□□□□ -1.32
USP28-205ENST00000537706 DYRK1AQ13627 763 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 GPR176Q14439 515 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 ODF4Q2M2E3 257 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 SLC25A48Q6ZT89 311 aaKnown RBP6.81□□□□□ -1.32
USP28-205ENST00000537706 SLC38A6Q8IZM9 456 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 CCDC54Q8NEL0 328 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 NPBQ8NG41 125 aa6.81□□□□□ -1.32
USP28-205ENST00000537706 OR51T1Q8NGJ9 327 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms