RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 TRIM63Q969Q1 353 aa6.99□□□□□ -1.29
CCDC90B-217ENST00000530253 CREB3L1Q96BA8 519 aa6.99□□□□□ -1.29
CCDC90B-217ENST00000530253 SRRQ9GZT4 340 aa6.99□□□□□ -1.29
CCDC90B-217ENST00000530253 IFT46Q9NQC8 304 aa6.99□□□□□ -1.29
CCDC90B-217ENST00000530253 HILPDAQ9Y5L2 63 aa6.99□□□□□ -1.29
CCDC90B-217ENST00000530253 IGKV1D-13A0A0B4J2D9 117 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 FAM90A9PA6NNJ1 464 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 CLDN34H7C241 214 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 HSPA12AO43301 675 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 CD74P04233 296 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 OR5H8P0DN80 308 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 IGKV1-13P0DP09 117 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 NFYAP23511 347 aaPredicted RBP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 PTBP1P26599 531 aaKnown RBP eCLIP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 HLA-DMAP28067 261 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 S100A5P33763 92 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 HRH1P35367 487 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 CEACAM3P40198 252 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 OR3A3P47888 321 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 REG1BP48304 166 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 ARPC4P59998 168 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 ACTBP60709 375 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 ACTG1P63261 375 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 SSBP1Q04837 148 aaKnown RBP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 SLC9A3R2Q15599 337 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 LRRC75BQ2VPJ9 315 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 PLA1AQ53H76 456 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 VAX1Q5SQQ9 334 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 FAM71F2Q6NXP2 309 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 FAM131AQ6UXB0 335 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 LINC00299Q6ZSB3 139 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 LYG1Q8N1E2 194 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 TMEM86BQ8N661 226 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 OR10X1Q8NGY0 326 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 ZNF418Q8TF45 676 aaPredicted RBP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 FAM216AQ8WUB2 273 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 SSMEM1Q8WWF3 244 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 TOMM40LQ969M1 308 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 ABHD14BQ96IU4 210 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 SDHCQ99643 169 aaPredicted RBP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 NECAP2Q9NVZ3 263 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 ZNF107Q9UII5 783 aaPredicted RBP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 TMA7Q9Y2S6 64 aaKnown RBP6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 FAM96BQ9Y3D0 163 aa6.98□□□□□ -1.29
CCDC90B-217ENST00000530253 IGHV1-3A0A0C4DH29 117 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 H3BUX3 64 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 TIMM23O14925 209 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 TCF21O43680 179 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 PPYP01298 95 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 PMP2P02689 132 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 CD3DP04234 171 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 OR8U9P0C7N5 309 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 AADACP22760 399 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 IL3RAP26951 378 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 PPIFP30405 207 aaKnown RBP6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 FCGR2CP31995 323 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 RFX2P48378 723 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 RAB7AP51149 207 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 TAS2R46P59540 309 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 UBA52P62987 128 aaKnown RBP6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 BAMBIQ13145 260 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 RPL39P5Q59GN2 51 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 CCBE1Q6UXH8 406 aaPredicted RBP6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 OR8H3Q8N146 312 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 TMEM229BQ8NBD8 167 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 OR5H2Q8NGV7 314 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 OR8U1Q8NH10 309 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 GIMAP1Q8WWP7 306 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 FCAMRQ8WWV6 532 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 RPEQ96AT9 228 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 SSX3Q99909 188 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 NABP2Q9BQ15 211 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 GINS4Q9BRT9 223 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 MRPL20Q9BYC9 149 aaKnown RBP6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 CHIAQ9BZP6 476 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 FXYD6Q9H0Q3 95 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 OR2D2Q9H210 308 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 EHFQ9NZC4 300 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 GAB2Q9UQC2 676 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 OR2W1Q9Y3N9 320 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 POMT1Q9Y6A1 747 aa6.97□□□□□ -1.29
CCDC90B-217ENST00000530253 ANK2Q01484 3957 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 IGKV2D-30A0A075B6S6 120 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 ANKRD20A5PA0PJZ0 165 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 A6NDX4 124 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 ZNF736B4DX44 427 aaPredicted RBP6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 M0QYG6 137 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 RAB29O14966 203 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 TXNL1O43396 289 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 CHST1O43916 411 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 RBBP9O75884 186 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 GAPDHP04406 335 aaKnown RBP6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 ZNF735P0CB33 412 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 CT45A6P0DMU7 189 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 CT45A5P0DMU8 189 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 CT45A7P0DMV0 189 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 TBPP20226 339 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 RAB13P51153 203 aa6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 EIF4EBP1Q13541 118 aaPredicted RBP6.96□□□□□ -1.3
CCDC90B-217ENST00000530253 EBI3Q14213 229 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms