RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 AKIRIN2Q53H80 203 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 IDO2Q6ZQW0 420 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 HOGA1Q86XE5 327 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 OR11H1Q8NG94 326 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 OR13F1Q8NGS4 319 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 MRAPQ8TCY5 172 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 TSNAXQ99598 290 aaKnown RBP8.23□□□□□ -1.09
CD44-227ENST00000528086 GINS4Q9BRT9 223 aa8.23□□□□□ -1.09
CD44-227ENST00000528086 FOXA2Q9Y261 457 aaPredicted RBP8.23□□□□□ -1.09
CD44-227ENST00000528086 RBMX2Q9Y388 322 aaKnown RBP8.23□□□□□ -1.09
CD44-227ENST00000528086 MEIS3P1A6NDR6 274 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 E7EUB6 86 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 XRCC3O43542 346 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 CRYZL1O95825 349 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 APOA2P02652 100 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 EIF4EP06730 217 aaKnown RBP8.22□□□□□ -1.09
CD44-227ENST00000528086 OR5H8P0DN80 308 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 AADACP22760 399 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 LGALS7P47929 136 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 GNG2P59768 71 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 VBP1P61758 197 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 PITPNAQ00169 270 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 FXYD3Q14802 87 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 ARL6IP1Q15041 203 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 CTF1Q16619 201 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 UNQ5815/PRO19632Q6UWF5 114 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 OVCH2Q7RTZ1 564 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 REC114Q7Z4M0 266 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 ZNF645Q8N7E2 425 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 BEST4Q8NFU0 473 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 ARPC1AQ92747 370 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 SLC25A46Q96AG3 418 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 RHOVQ96L33 236 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 HARBI1Q96MB7 349 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 MS4A10Q96PG2 267 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 VSIG4Q9Y279 399 aa8.22□□□□□ -1.09
CD44-227ENST00000528086 IGHV4OR15-8A0A075B7B6 117 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 A0A087WW49 117 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 A0A0A6YYH2 397 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 A6NJ64 397 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 SCGNO76038 276 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 DUS4LO95620 317 aaKnown RBP8.21□□□□□ -1.1
CD44-227ENST00000528086 IGHV3-11P01762 117 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 CTXN2P0C2S0 81 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 SLURP1P55000 103 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 UBE2KP61086 200 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 PLGLAQ15195 96 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 PRSS8Q16651 343 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 ACTBL2Q562R1 376 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 OR2B11Q5JQS5 317 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 C10orf55Q5SWW7 151 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 LYSMD2Q8IV50 215 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 VKORC1L1Q8N0U8 176 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 OR5T1Q8NG75 326 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 OR1N2Q8NGR9 330 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 GRPEL2Q8TAA5 225 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 DCUN1D4Q92564 292 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 DLX4Q92988 240 aaPredicted RBP8.21□□□□□ -1.1
CD44-227ENST00000528086 CCL28Q9NRJ3 127 aa8.21□□□□□ -1.1
CD44-227ENST00000528086 CGB1A6NKQ9 187 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 SHOXO15266 292 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 RAMP3O60896 148 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 TRBV12-3P01733 135 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
CD44-227ENST00000528086 SAA1P0DJI8 122 aaPredicted RBP8.2□□□□□ -1.1
CD44-227ENST00000528086 APELAP0DMC3 54 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 MYOD1P15172 320 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 NAT1P18440 290 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 FCGR2CP31995 323 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 ALDH3B2P48448 385 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 RAB25P57735 213 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 TAS2R20P59543 309 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 TAGLNQ01995 201 aaKnown RBP8.2□□□□□ -1.1
CD44-227ENST00000528086 ZNF45Q02386 682 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 ZNF616Q08AN1 781 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 C19orf35Q6ZS72 473 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 TCTEX1D1Q8N7M0 179 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 SAMD12Q8N8I0 201 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 ADTRPQ96IZ2 230 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 ZNF430Q9H8G1 570 aaPredicted RBP8.2□□□□□ -1.1
CD44-227ENST00000528086 ADAM30Q9UKF2 790 aa8.2□□□□□ -1.1
CD44-227ENST00000528086 FCGR3BO75015 233 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 TMEM127O75204 238 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 PPYP01298 95 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 IL6RP08887 468 aaPredicted RBP8.19□□□□□ -1.1
CD44-227ENST00000528086 DYRK1AQ13627 763 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 TIMM50Q3ZCQ8 353 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 UBE2NLQ5JXB2 153 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 TMEM65Q6PI78 240 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 PUSL1Q8N0Z8 303 aaKnown RBP8.19□□□□□ -1.1
CD44-227ENST00000528086 MFSD4AQ8N468 514 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 TEX45Q8NA69 505 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 ADAD2Q8NCV1 583 aaKnown RBP8.19□□□□□ -1.1
CD44-227ENST00000528086 OR5M8Q8NGP6 311 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 ABHD5Q8WTS1 349 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 TAS2R8Q9NYW2 309 aa8.19□□□□□ -1.1
CD44-227ENST00000528086 LSM4Q9Y4Z0 139 aaKnown RBP8.19□□□□□ -1.1
CD44-227ENST00000528086 RBM7Q9Y580 266 aaKnown RBP8.19□□□□□ -1.1
CD44-227ENST00000528086 MSGN1A6NI15 193 aa8.18□□□□□ -1.1
CD44-227ENST00000528086 SEC14L6B5MCN3 397 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms