RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 ETV2O00321 342 aaPredicted RBP8.4□□□□□ -1.06
USP35-201ENST00000526425 CDIPTO14735 213 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 ZNF207O43670 478 aaKnown RBP8.4□□□□□ -1.06
USP35-201ENST00000526425 TNFSF13O75888 250 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 BMP5P22003 454 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 HIST3H3Q16695 136 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 TMEM144Q7Z5S9 345 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 CCDC71LQ8N9Z2 235 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 RNF138Q8WVD3 245 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 C2orf50Q96LR7 162 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 SPTBN4Q9H254 2564 aa8.4□□□□□ -1.06
USP35-201ENST00000526425 DSPP15924 2871 aaKnown RBP8.4□□□□□ -1.06
USP35-201ENST00000526425 NCOR2Q9Y618 2525 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 IGKV1-12A0A0C4DH73 117 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 DIRC3C9JPN6 131 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 K7EQM0 130 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 IGKV1D-12P01611 117 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 CLDN18P56856 261 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 RPS16P62249 146 aaKnown RBP8.4□□□□□ -1.07
USP35-201ENST00000526425 CEACAM21Q3KPI0 293 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 RFESDQ8TAC1 157 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 Q96M66 194 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 TRAPPC1Q9Y5R8 145 aa8.4□□□□□ -1.07
USP35-201ENST00000526425 MGAQ8IWI9 3026 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 CORTO00230 105 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 NBEAP1P0C6P0 100 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 PTGER4P35408 488 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 GALR1P47211 349 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 CNN1P51911 297 aaKnown RBP8.39□□□□□ -1.07
USP35-201ENST00000526425 QRFPP83859 136 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 MOB3AQ96BX8 217 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 LYRM2Q9NU23 88 aaPredicted RBP8.39□□□□□ -1.07
USP35-201ENST00000526425 DMDP11532 3685 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 RPL36A-HNRNPH2H7BZ11 118 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 HMGB3O15347 200 aaKnown RBP8.39□□□□□ -1.07
USP35-201ENST00000526425 SCTP09683 121 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 AZU1P20160 251 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 NBL1P41271 181 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 CEBPDP49716 269 aaPredicted RBP8.39□□□□□ -1.07
USP35-201ENST00000526425 RNPS1Q15287 305 aaKnown RBP8.39□□□□□ -1.07
USP35-201ENST00000526425 KIAA1644Q3SXP7 199 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 DEFB108BQ8NET1 73 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 DERL1Q9BUN8 251 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 ABCA1O95477 2261 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 DYSFO75923 2080 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 NUPR1O60356 82 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 CST7O76096 145 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 RNFT1Q5M7Z0 435 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 ZNF788Q6ZQV5 615 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 FAM58AQ8N1B3 248 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 TPRX1Q8N7U7 411 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 SARAFQ96BY9 339 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 WIPI2Q9Y4P8 454 aa8.39□□□□□ -1.07
USP35-201ENST00000526425 hCG_38984A0A1B0GV85 526 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 FAM157AC9JC47 383 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 SSSCA1O60232 199 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 LILRA1O75019 489 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 TFF1P04155 84 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 PAX1P15863 534 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 HOXA4Q00056 320 aaPredicted RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 IL24Q13007 206 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 IZUMO4Q1ZYL8 232 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 PRR31Q5SQ13 230 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 ZNF826PQ6ZT77 177 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 LINC01551Q86U37 167 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 BOD1L1Q8NFC6 3051 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 OR4D5Q8NGN0 318 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 NINJ1Q92982 152 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 PARLQ9H300 379 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 UQCR10Q9UDW1 63 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 ERRFI1Q9UJM3 462 aaPredicted RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 ARHGAP21Q5T5U3 1957 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 IGHV2OR16-5A0A0B4J2B6 119 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 RHBDL1O75783 438 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 RBM11P57052 281 aaKnown RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 TMEM267Q0VDI3 215 aaPredicted RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 LGI3Q8N145 548 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 SIGLECL1Q8N7X8 197 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 HS3ST6Q96QI5 342 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 CHRDL1Q9BU40 450 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 RBKSQ9H477 322 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 SH2D2AQ9NP31 389 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 ZNF71Q9NQZ8 489 aaPredicted RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 H0Y8G0 127 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 SPINK4O60575 86 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 CRYGSP22914 178 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 PLP1P60201 277 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 GNG3P63215 75 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 SRSF7Q16629 238 aaKnown RBP eCLIP8.38□□□□□ -1.07
USP35-201ENST00000526425 C16orf82Q7Z2V1 217 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 C1orf147Q96MC9 270 aaPredicted RBP8.38□□□□□ -1.07
USP35-201ENST00000526425 NRN1Q9NPD7 142 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 CRIM1Q9NZV1 1036 aa8.38□□□□□ -1.07
USP35-201ENST00000526425 MED12LQ86YW9 2145 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 KIR2DL5BA0A0G2JN68 375 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 KIR2DL5BA0A0G2JPC4 375 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 GAGE10A6NGK3 116 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 TPPP2P59282 170 aa8.37□□□□□ -1.07
USP35-201ENST00000526425 PPP1CBP62140 327 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms