RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 OR52L1Q8NGH7 329 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 OR52P1PQ8NH57 321 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 CLDND2Q8NHS1 167 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 LINC01006Q8NI28 216 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 STOML3Q8TAV4 291 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 NT5CQ8TCD5 201 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 SLC25A46Q96AG3 418 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 SDSLQ96GA7 329 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 DIRAS2Q96HU8 199 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 OR10C1Q96KK4 312 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 OR7D2Q96RA2 312 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 MCHR1Q99705 422 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 NKX3-1Q99801 234 aaPredicted RBP4.12□□□□□ -1.75
PABPC1-223ENST00000523636 ARHGDIGQ99819 225 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 RNF122Q9H9V4 155 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 DNAJC27Q9NZQ0 273 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 GSKIPQ9P0R6 139 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 DUX4Q9UBX2 424 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 PRODH2Q9UF12 536 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 DKKL1Q9UK85 242 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 VPREB3Q9UKI3 123 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 HHLA2Q9UM44 414 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 PROCRQ9UNN8 238 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 BAIAP2Q9UQB8 552 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 LSM2Q9Y333 95 aaKnown RBP4.12□□□□□ -1.75
PABPC1-223ENST00000523636 ALG5Q9Y673 324 aa4.12□□□□□ -1.75
PABPC1-223ENST00000523636 TGIF2-C20orf24A0A0A6YYL0 155 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 MPTX1A8MV57 137 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 KRBOX1C9JBD0 128 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 H7C2Y5 167 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 K7EP13 123 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 CDIPTO14735 213 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SNAPC5O75971 98 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SLC22A5O76082 557 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SOX14O95416 240 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 NTN1O95631 604 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 HBE1P02100 147 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 ZNF708P17019 499 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 ZNF17P17021 662 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 GABRR1P24046 479 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SLC6A1P30531 599 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 RBP2P50120 134 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 RAB7AP51149 207 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 CCR6P51684 374 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 LMO4P61968 165 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 PAFAH1B2P68402 229 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 MRPS11P82912 194 aaKnown RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 BIKQ13323 160 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 GRK1Q15835 563 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SSX1Q16384 188 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 PYDC2Q56P42 97 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 RNASE10Q5GAN6 216 aaKnown RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 RSBN1Q5VWQ0 802 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 ZNF774Q6NX45 483 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SHFQ7M4L6 423 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SLC36A1Q7Z2H8 476 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 C16orf82Q7Z2V1 217 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 FAM220AQ7Z4H9 259 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 NIT1Q86X76 327 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 FBXL14Q8N1E6 418 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 CLIP4Q8N3C7 705 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 MORN4Q8NDC4 146 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 OR5D16Q8NGK9 328 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 OR6T1Q8NGN1 323 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 CASTOR1Q8WTX7 329 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 HPSE2Q8WWQ2 592 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 C11orf40Q8WZ69 217 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 DYRK2Q92630 601 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 RPL36ALQ969Q0 106 aaKnown RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 RAB3CQ96E17 227 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 CNRIP1Q96F85 164 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 MS4A4EQ96PG1 132 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 NEDD4LQ96PU5 975 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 MIXL1Q9H2W2 232 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 SPANXB1Q9NS25 103 aaPredicted RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 MED9Q9NWA0 146 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 TXNL4BQ9NX01 149 aaKnown RBP4.11□□□□□ -1.75
PABPC1-223ENST00000523636 CES1P1Q9UKY3 287 aa4.11□□□□□ -1.75
PABPC1-223ENST00000523636 A0A087WUU8 490 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 MDFIC2A0A1B0GVS7 189 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 DAPL1A0PJW8 107 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 TRAPPC13A5PLN9 417 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 CPSF4LA6NMK7 179 aaKnown RBP4.1□□□□□ -1.75
PABPC1-223ENST00000523636 PRR32B1ATL7 298 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 LYNX1G3V0Z9 82 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 BHLHE40O14503 412 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 HSD17B6O14756 317 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 DLEU1O43261 78 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 SLC16A7O60669 478 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 AIFM1O95831 613 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 TBX6O95947 436 aaPredicted RBP4.1□□□□□ -1.75
PABPC1-223ENST00000523636 CRYAAP02489 173 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 RLN2P04090 185 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 LYNX1P0DP58 116 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 ALOX5APP20292 161 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 TGFBR1P36897 503 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 RPL35P42766 123 aaKnown RBP4.1□□□□□ -1.75
PABPC1-223ENST00000523636 OR3A2P47893 321 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 FABP6P51161 128 aa4.1□□□□□ -1.75
PABPC1-223ENST00000523636 AKR1D1P51857 326 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 235.9 ms