RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 DIMT1Q9UNQ2 313 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 EXOSC1Q9Y3B2 195 aaKnown RBP15.14■□□□□ 0.01
SQSTM1-215ENST00000514093 TRBV6-6A0A0A6YYG2 114 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 GGCTO75223 188 aaKnown RBP15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 IGHV3-23P01764 117 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 UBBP0CG47 229 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 BMI1P35226 326 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 PRSS8Q16651 343 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 C15orf32Q32M92 178 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 TM4SF20Q53R12 229 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 TMEM177Q53S58 311 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 ZNF485Q8NCK3 441 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 PHLDA1Q8WV24 401 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 GGHQ92820 318 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 TM2D1Q9BX74 207 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 RIMS4Q9H426 269 aaPredicted RBP15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 Q9N2K0 584 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 SDHAF2Q9NX18 166 aa15.13■□□□□ 0.01
SQSTM1-215ENST00000514093 SOCS1O15524 211 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 CD3GP09693 182 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 PRR20EP86478 221 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 PRR20CP86479 221 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 PRR20DP86480 221 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 PRR20BP86481 221 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 PRR20AP86496 221 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 INSL4Q14641 139 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 C19orf35Q6ZS72 473 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 C5orf30Q96GV9 206 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 OR2D2Q9H210 308 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 S4R3C0 116 aa15.12■□□□□ 0.01
SQSTM1-215ENST00000514093 ZNF320A2RRD8 509 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 TMEM213A2RRL7 107 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 LGALS9O00182 355 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 CIB2O75838 187 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 C10orf55Q5SWW7 151 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 UXS1Q8NBZ7 420 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 NECAP1Q8NC96 275 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 TP53TG1Q9Y2A0 90 aa15.11■□□□□ 0.01
SQSTM1-215ENST00000514093 CELP19835 753 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 QRFPP83859 136 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 TAGLNQ01995 201 aaKnown RBP15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 CBX3Q13185 183 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 VMA21Q3ZAQ7 101 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 BTNL8Q6UX41 500 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 Q6ZWC4 215 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 TTC9CQ8N5M4 171 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 TEX45Q8NA69 505 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 TMEM80Q96HE8 168 aa15.1■□□□□ 0.01
SQSTM1-215ENST00000514093 TMEM14DPA8MWL7 114 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 RASSF2P50749 326 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 UBE2KP61086 200 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 RTL8BQ17RB0 113 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 ANKRD55Q3KP44 614 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 C1orf100Q5SVJ3 147 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 GPHB5Q86YW7 130 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 LPAR5Q9H1C0 372 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 UBQLN2Q9UHD9 624 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 MGAT4AQ9UM21 535 aa15.09■□□□□ 0.01
SQSTM1-215ENST00000514093 IRGMA1A4Y4 181 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 HMX3A6NHT5 357 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 CRYZL1O95825 349 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 ARL3P36405 182 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 APOC4P55056 127 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 GLT8D1Q68CQ7 371 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 CLEC19AQ6UXS0 136 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 LRRTM1Q86UE6 522 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 C9orf16Q9BUW7 83 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 ZNF430Q9H8G1 570 aaPredicted RBP15.08■□□□□ 0
SQSTM1-215ENST00000514093 C12orf4Q9NQ89 552 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 FBXL7Q9UJT9 491 aa15.08■□□□□ 0
SQSTM1-215ENST00000514093 TRDCB7Z8K6 153 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 BET1O15155 118 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 ATF4P18848 351 aaPredicted RBP15.07■□□□□ 0
SQSTM1-215ENST00000514093 SRMP19623 302 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 TAS2R43P59537 309 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 MED21Q13503 144 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 CEACAM19Q7Z692 300 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 RNF183Q96D59 192 aa15.07■□□□□ 0
SQSTM1-215ENST00000514093 ACTL6BO94805 426 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 MAPK3P27361 379 aaPredicted RBP15.06■□□□□ 0
SQSTM1-215ENST00000514093 TMEM50BP56557 158 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 FAM106AQ4KMX7 169 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 IGSF11Q5DX21 431 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 RBM48Q5RL73 367 aaKnown RBP15.06■□□□□ 0
SQSTM1-215ENST00000514093 TMEM217Q8N7C4 229 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 OR1L6Q8NGR2 347 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 ARHGAP5-AS1Q96IT6 56 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 CCDC140Q96MF4 163 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 SPIN2AQ99865 258 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 SPIN2BQ9BPZ2 258 aa15.06■□□□□ 0
SQSTM1-215ENST00000514093 CMSS1Q9BQ75 279 aaKnown RBP15.06■□□□□ 0
SQSTM1-215ENST00000514093 SAA1P0DJI8 122 aaPredicted RBP15.05■□□□□ -0
SQSTM1-215ENST00000514093 RRASP10301 218 aa15.05■□□□□ -0
SQSTM1-215ENST00000514093 P2RY14Q15391 338 aa15.05■□□□□ -0
SQSTM1-215ENST00000514093 ACSM3Q53FZ2 586 aa15.05■□□□□ -0
SQSTM1-215ENST00000514093 RBPMS2Q6ZRY4 209 aaKnown RBP15.05■□□□□ -0
SQSTM1-215ENST00000514093 ZNF555Q8NEP9 628 aa15.05■□□□□ -0
SQSTM1-215ENST00000514093 PECRQ9BY49 303 aa15.05■□□□□ -0
SQSTM1-215ENST00000514093 DNAH6Q9C0G6 4158 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms