RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 KRTCAP2Q8N6L1 136 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR52L1Q8NGH7 329 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR2T4Q8NH00 348 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CIRBP-AS1Q8TBR5 109 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PYURFQ96I23 114 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 LINC00477Q96M19 166 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GPR82Q96P67 336 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PEBP4Q96S96 227 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GPER1Q99527 375 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 CCL13Q99616 98 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GINS3Q9BRX5 216 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 NKX6-2Q9C056 277 aaPredicted RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 RNASE7Q9H1E1 156 aaKnown RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 MIXL1Q9H2W2 232 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PARVBQ9HBI1 364 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 GPR84Q9NQS5 396 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 DAZ1Q9NQZ3 744 aaKnown RBP1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 KCNIP2Q9NS61 270 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 UQCC1Q9NVA1 299 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 C14orf105Q9NVL8 296 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMEM38BQ9NVV0 291 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 AK3Q9UIJ7 227 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 RWDD2AQ9UIY3 292 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF835Q9Y2P0 537 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 NDUFAF1Q9Y375 327 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 HSPB11Q9Y547 144 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 RFNGQ9Y644 331 aa1.41□□□□□ -2.18
HMGB1P35-201ENST00000503360 PTPRTO14522 1441 aa1.4□□□□□ -2.18
HMGB1P35-201ENST00000503360 PLCH2O75038 1416 aa1.4□□□□□ -2.18
HMGB1P35-201ENST00000503360 PIK3C2GO75747 1445 aa1.4□□□□□ -2.18
HMGB1P35-201ENST00000503360 WRNQ14191 1432 aaPredicted RBP eCLIP1.4□□□□□ -2.18
HMGB1P35-201ENST00000503360 TNS2Q63HR2 1409 aa1.4□□□□□ -2.18
HMGB1P35-201ENST00000503360 DNMT1P26358 1616 aaKnown RBP1.4□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM236DA0A1B0GTK5 79 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 A0A1B0GW54 56 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR5H14A6NHG9 310 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF850A8MQ14 1090 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 AIPO00170 330 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 GPR31O00270 319 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ORC5O43913 435 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 NDUFC2O95298 119 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 FSTL3O95633 263 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 CRYZL1O95825 349 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 DHFRP00374 187 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 HLA-DRB1P01911 266 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OPN1SWP03999 348 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 CD7P09564 240 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR5AC1P0C628 307 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF286BP0CG31 522 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 FAM236CP0DP71 79 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 SCGB1A1P11684 91 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ATP6V0CP27449 155 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ALDH3A1P30838 453 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 PHBP35232 272 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OPRM1P35372 400 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 PPP1CCP36873 323 aaKnown RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ELF3P78545 371 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 RUNX1Q01196 453 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 GNA12Q03113 381 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 IL15RAQ13261 267 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 SMCO1Q147U7 214 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 PDGFRLQ15198 375 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 KCNJ8Q15842 424 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 GLT8D1Q68CQ7 371 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 PRSS54Q6PEW0 395 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 BAP18Q8IXM2 172 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF101Q8IZC7 436 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 SLC22A24Q8N4F4 322 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF561Q8N587 486 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF709Q8N972 641 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF439Q8NDP4 499 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR4A5Q8NH83 315 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR10J5Q8NHC4 309 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 SKA2Q8WVK7 121 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 RTN4IP1Q8WWV3 396 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ACOT12Q8WYK0 555 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 C12orf43Q96C57 262 aaKnown RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ROPN1LQ96C74 230 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 GNPNAT1Q96EK6 184 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 L3HYPDHQ96EM0 354 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 NMNAT3Q96T66 252 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 TBX5Q99593 518 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 AIF1LQ9BQI0 150 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF2Q9BSG1 426 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 TMEM70Q9BUB7 260 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 C1orf50Q9BV19 199 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 RSPO3Q9BXY4 272 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ALX4Q9H161 411 aaPredicted RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ABCG5Q9H222 651 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 SH3BGRL3Q9H299 93 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ZNF286AQ9HBT8 521 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 FAM60AQ9NP50 221 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 CMTM6Q9NX76 183 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 TAAR3PQ9P1P4 343 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ANAPC10Q9UM13 185 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 OR51B4Q9Y5P0 310 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 CHD2O14647 1828 aaKnown RBP1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 ARAP3Q8WWN8 1544 aa1.4□□□□□ -2.19
HMGB1P35-201ENST00000503360 SYNMO15061 1565 aa1.39□□□□□ -2.19
HMGB1P35-201ENST00000503360 PLA2R1Q13018 1463 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms