RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 ZNF230Q9UIE0 474 aaPredicted RBP8.29□□□□□ -1.08
SNRNP200-207ENST00000493271 ADAM30Q9UKF2 790 aa8.29□□□□□ -1.08
SNRNP200-207ENST00000493271 TRBV9A0A0B4J1U6 114 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 CXorf65A6NEN9 183 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 BMPR1BO00238 502 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 MYL12BO14950 172 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 MPPED1O15442 326 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 ATF4P18848 351 aaPredicted RBP8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 WNT4P56705 351 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 RHOGP84095 191 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 PJVKQ0ZLH3 352 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 UNC119Q13432 240 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 EXOSC2Q13868 293 aaKnown RBP8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 GUCA2BQ16661 112 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 OR10K2Q6IF99 312 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 SLC25A42Q86VD7 318 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 NECAP1Q8NC96 275 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 OR6M1Q8NGM8 313 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 OR4A4PQ8NGN8 299 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 ADTRPQ96IZ2 230 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 CYYR1Q96J86 154 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 SPIN2AQ99865 258 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 SPIN2BQ9BPZ2 258 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 GGTLC1Q9BX51 225 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 RDH8Q9NYR8 311 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 AK3Q9UIJ7 227 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 TP53TG1Q9Y2A0 90 aa8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 KLK5Q9Y337 293 aaPredicted RBP8.28□□□□□ -1.08
SNRNP200-207ENST00000493271 FRAS1Q86XX4 4008 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 LOC102724200A0A096LPH7 203 aaPredicted RBP8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 PNMA8CA0A1B0GUJ8 204 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 A6NHS1 94 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 MSGN1A6NI15 193 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 C2orf70A6NJV1 201 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 TRDCB7Z8K6 153 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 GGCTO75223 188 aaKnown RBP8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 ACTL6BO94805 426 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 SCTP09683 121 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 CD37P11049 281 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 FOLR2P14207 255 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 UBE2KP61086 200 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 ST3GAL4Q11206 333 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 RBM48Q5RL73 367 aaKnown RBP8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 WFDC3Q8IUB2 231 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 FAM89BQ8N5H3 189 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 DHRSXQ8N5I4 330 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 OSR1Q8TAX0 266 aaPredicted RBP8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 SRSF12Q8WXF0 261 aaKnown RBP8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 GGHQ92820 318 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 NICN1Q9BSH3 213 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 MRPS26Q9BYN8 205 aaKnown RBP8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 LPAR5Q9H1C0 372 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 AKIP1Q9NQ31 210 aa8.27□□□□□ -1.09
SNRNP200-207ENST00000493271 LINC00205P59089 165 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 MRPS15P82914 257 aaKnown RBP8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 QRFPP83859 136 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 TNFRSF9Q07011 255 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 TNXAQ16473 311 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 PRSS8Q16651 343 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 ACSM3Q53FZ2 586 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 LRRTM1Q86UE6 522 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 GPHB5Q86YW7 130 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 TTC9CQ8N5M4 171 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 TMEM217Q8N7C4 229 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 CYGBQ8WWM9 190 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 CMSS1Q9BQ75 279 aaKnown RBP8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 OVOL2Q9BRP0 275 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 OR2D2Q9H210 308 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 SDHAF2Q9NX18 166 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 NDUFA13Q9P0J0 144 aa8.26□□□□□ -1.09
SNRNP200-207ENST00000493271 A0A0A6YYD4 124 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 TRAV25A0A0B4J276 109 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 IGKV1-6A0A0C4DH72 117 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 DPPA5A6NC42 116 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 FOXI3A8MTJ6 420 aaPredicted RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 A8MWP6 167 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 SOCS1O15524 211 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 RBMXL2O75526 392 aaKnown RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 SNRPBP14678 240 aaKnown RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 CBLN1P23435 193 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 BMI1P35226 326 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 DEFA5Q01523 94 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 SSX1Q16384 188 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 MRGPRG-AS1Q2M3A8 158 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 C15orf32Q32M92 178 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 KCTD21Q4G0X4 260 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 HSD17B12Q53GQ0 312 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 ZNF57Q68EA5 555 aaPredicted RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 OR4A47Q6IF82 309 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 CEMP1Q6PRD7 247 aaPredicted RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 Q6ZWC4 215 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 MMD2Q8IY49 270 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 OR52B4Q8NGK2 314 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 OR10J5Q8NHC4 309 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 ACOT12Q8WYK0 555 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 HDHD3Q9BSH5 251 aaPredicted RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 CABLES2Q9BTV7 478 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 WFDC10AQ9H1F0 79 aa8.25□□□□□ -1.09
SNRNP200-207ENST00000493271 ZNF257Q9Y2Q1 563 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 122.5 ms