RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 SIGIRRQ6IA17 410 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 C5orf24Q7Z6I8 188 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 NR2C2APQ86WQ0 139 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 CDH26Q8IXH8 852 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 CENPSQ8N2Z9 138 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 NKAIN3Q8N8D7 197 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 UXS1Q8NBZ7 420 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 SMIM19Q96E16 107 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 RARRES2Q99969 163 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 C11orf54Q9H0W9 315 aaPredicted RBP5.66□□□□□ -1.5
PDPN-205ENST00000487038 GHRLQ9UBU3 117 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 UBQLN2Q9UHD9 624 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 APLNQ9ULZ1 77 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 SELENOKQ9Y6D0 94 aa5.66□□□□□ -1.5
PDPN-205ENST00000487038 DPPA5A6NC42 116 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 OR4C46A6NHA9 309 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 OR2J3O76001 311 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 DHFRP00374 187 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 CRYGBP07316 175 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 MYOD1P15172 320 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 RPL35AP18077 110 aaKnown RBP5.65□□□□□ -1.5
PDPN-205ENST00000487038 FCGR2BP31994 310 aaPredicted RBP5.65□□□□□ -1.5
PDPN-205ENST00000487038 GTF2A1P52655 376 aaPredicted RBP5.65□□□□□ -1.5
PDPN-205ENST00000487038 MFAP2P55001 183 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 TPBGQ13641 420 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 Q499Y3 187 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 LAMTOR1Q6IAA8 161 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 ZNF880Q6PDB4 577 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 TTC9CQ8N5M4 171 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 TEX45Q8NA69 505 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 PTX4Q96A99 478 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 EEF1AKMT3Q96AZ1 226 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 Q96MT0 163 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 RIMS4Q9H426 269 aaPredicted RBP5.65□□□□□ -1.5
PDPN-205ENST00000487038 MAP6D1Q9H9H5 199 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 MRPL27Q9P0M9 148 aaKnown RBP5.65□□□□□ -1.5
PDPN-205ENST00000487038 OR1A1Q9P1Q5 309 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 POMPQ9Y244 141 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 ZNF257Q9Y2Q1 563 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 UFC1Q9Y3C8 167 aa5.65□□□□□ -1.5
PDPN-205ENST00000487038 APOBP04114 4563 aaKnown RBP5.64□□□□□ -1.51
PDPN-205ENST00000487038 LRP1BQ9NZR2 4599 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 MPTX1A8MV57 137 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 TSPAN4O14817 238 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 NAPSAO96009 420 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 UBBP0CG47 229 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 P0DMU3 169 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 FAM231AP0DMU4 169 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 FAM231CP0DMU5 169 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 GALP22466 123 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 GYS2P54840 703 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 ELLP55199 621 aaPredicted RBP5.64□□□□□ -1.51
PDPN-205ENST00000487038 UBE2KP61086 200 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 PRSS8Q16651 343 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 ZNF585BQ52M93 769 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 YIF1BQ5BJH7 314 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 SOHLH1Q5JUK2 328 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 PVRIGQ6DKI7 326 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 CLEC19AQ6UXS0 136 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 TMPRSS11AQ6ZMR5 421 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 MMD2Q8IY49 270 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 ORAI1Q96D31 301 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 UQCC2Q9BRT2 126 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 FAAP24Q9BTP7 215 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 TMEM59Q9BXS4 323 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 KRTAP4-5Q9BYR2 181 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 OR2D2Q9H210 308 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 C5orf66Q9H5L9 145 aa5.64□□□□□ -1.51
PDPN-205ENST00000487038 TRAV8-7A0A075B6U6 113 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 TRBV5-5A0A0J9YX44 114 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 GYG2O15488 501 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 PROP1O75360 226 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 ADMP35318 185 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 SERPINB10P48595 397 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 LINC00205P59089 165 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 MED21Q13503 144 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 CDK10Q15131 360 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 ODF3L2Q3SX64 289 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 XAF1Q6GPH4 301 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 C6orf201Q7Z4U5 140 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 MAPKAPK5-AS1Q8N8E1 139 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 SETD9Q8NE22 299 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 OR52I1Q8NGK6 324 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 OR13C5Q8NGS8 318 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 OR11H2Q8NH07 326 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 OSR1Q8TAX0 266 aaPredicted RBP5.63□□□□□ -1.51
PDPN-205ENST00000487038 CD300LFQ8TDQ1 290 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 CCDC140Q96MF4 163 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 CSTL1Q9H114 145 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 HRH4Q9H3N8 390 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 PLEKHJ1Q9NW61 149 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 RDH8Q9NYR8 311 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 OAZ3Q9UMX2 235 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 RPL36Q9Y3U8 105 aaKnown RBP5.63□□□□□ -1.51
PDPN-205ENST00000487038 DMRT1Q9Y5R6 373 aa5.63□□□□□ -1.51
PDPN-205ENST00000487038 IGHV4-4A0A075B6R2 117 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 TRBV6-6A0A0A6YYG2 114 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 TRBV7-1A0A0A6YYK4 115 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 TRAV10A0A0B4J240 114 aa5.62□□□□□ -1.51
PDPN-205ENST00000487038 NPIPB5A8MRT5 1133 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms