RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CBX3Q13185 183 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 RPL39P5Q59GN2 51 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 LY6G6FQ5SQ64 297 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 MOB3BQ86TA1 216 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 Q8N2B8 174 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 ENKURQ8TC29 256 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 GIMAP1Q8WWP7 306 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 DPF1Q92782 380 aa11.54□□□□□ -0.56
USP11-207ENST00000478596 GAPDHP04406 335 aaKnown RBP11.53□□□□□ -0.56
USP11-207ENST00000478596 PF4V1P10720 104 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 LPCAT3Q6P1A2 487 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 CMTM1Q8IZ96 169 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 SLC38A6Q8IZM9 456 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.53□□□□□ -0.56
USP11-207ENST00000478596 TCTEX1D2Q8WW35 142 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 MRPL20Q9BYC9 149 aaKnown RBP11.53□□□□□ -0.56
USP11-207ENST00000478596 GHITMQ9H3K2 345 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 PALMDQ9NP74 551 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 STARD9Q9P2P6 4700 aa11.53□□□□□ -0.56
USP11-207ENST00000478596 OR5H14A6NHG9 310 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 TNFSF12O43508 249 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 APOA2P02652 100 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 PF4P02776 101 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 PAX6P26367 422 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 BRS3P32247 399 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 CATR1Q13166 79 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 HES1Q14469 280 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 PHLDA2Q53GA4 152 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 AADACL3Q5VUY0 350 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 FAM71F2Q6NXP2 309 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 LIAT1Q6ZQX7 453 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 KCTD9Q7L273 389 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 POC5Q8NA72 575 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 TERB2Q8NHR7 220 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 ZFAND1Q8TCF1 268 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 MARCH1Q8TCQ1 289 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 C17orf50Q8WW18 174 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 RTN4IP1Q8WWV3 396 aaPredicted RBP11.52□□□□□ -0.57
USP11-207ENST00000478596 MALSU1Q96EH3 234 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 SCGB3A2Q96PL1 93 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 SSX3Q99909 188 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 WNT10AQ9GZT5 417 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 TOLLIPQ9H0E2 274 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 ZNF702PQ9H963 129 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 CCL28Q9NRJ3 127 aa11.52□□□□□ -0.57
USP11-207ENST00000478596 OOSP1A8MZH6 123 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 H7C2Y5 167 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 GPR31O00270 319 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 RLN1P04808 185 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 CCR6P51684 374 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 CD83Q01151 205 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 RBMS2Q15434 407 aaKnown RBP11.51□□□□□ -0.57
USP11-207ENST00000478596 LY6EQ16553 131 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 AANATQ16613 207 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 LRRC75BQ2VPJ9 315 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 DHRS11Q6UWP2 260 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 TMED4Q7Z7H5 227 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 OR8H3Q8N146 312 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 DRAM1Q8N682 238 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 CCDC71LQ8N9Z2 235 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 OR13C8Q8NGS7 320 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 OR51H1Q8NH63 302 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 SDHAF2Q9NX18 166 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 SLC2A8Q9NY64 477 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 COPZ2Q9P299 210 aa11.51□□□□□ -0.57
USP11-207ENST00000478596 IGHV3-72A0A0B4J1Y9 119 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 IGHV1-3A0A0C4DH29 117 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 FAM240BA0A1B0GVZ2 78 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 CHST1O43916 411 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 ZNF735P0CB33 412 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 PI3P19957 117 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 THBS3P49746 956 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 ZNF816Q0VGE8 651 aaPredicted RBP11.5□□□□□ -0.57
USP11-207ENST00000478596 ASAH1Q13510 395 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 DIAPH2-AS1Q14236 149 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 HABP2Q14520 560 aaPredicted RBP11.5□□□□□ -0.57
USP11-207ENST00000478596 RTL8BQ17RB0 113 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 OR2B11Q5JQS5 317 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 ZNF660Q6AZW8 331 aaPredicted RBP11.5□□□□□ -0.57
USP11-207ENST00000478596 ZNF818PQ6ZRF7 136 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 ZNF833PQ6ZTB9 187 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 DRAXINQ8NBI3 349 aaPredicted RBP11.5□□□□□ -0.57
USP11-207ENST00000478596 CAPSLQ8WWF8 208 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 ADTRPQ96IZ2 230 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 AGMATQ9BSE5 352 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 PRELID3BQ9Y3B1 194 aa11.5□□□□□ -0.57
USP11-207ENST00000478596 LSM4Q9Y4Z0 139 aaKnown RBP11.5□□□□□ -0.57
USP11-207ENST00000478596 A0A1W2PPI3 338 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 A0A1W2PRX2 142 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 RAB13P51153 203 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 ZNF137PP52743 207 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 SURF2Q15527 256 aaPredicted RBP11.49□□□□□ -0.57
USP11-207ENST00000478596 GLDNQ6ZMI3 551 aaPredicted RBP11.49□□□□□ -0.57
USP11-207ENST00000478596 LHFPL1Q86WI0 220 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 ODF3L1Q8IXM7 274 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 ZBTB34Q8NCN2 500 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 ZNF486Q96H40 463 aaPredicted RBP11.49□□□□□ -0.57
USP11-207ENST00000478596 AKR1E2Q96JD6 320 aa11.49□□□□□ -0.57
USP11-207ENST00000478596 HSD17B10Q99714 261 aaKnown RBP11.49□□□□□ -0.57
USP11-207ENST00000478596 SLC25A21Q9BQT8 299 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms