RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PARP11Q9NR21 331 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 PRTFDC1Q9NRG1 225 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 RASL12Q9NYN1 266 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TMEM216Q9P0N5 145 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 WASHC3Q9Y3C0 194 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 FIS1Q9Y3D6 152 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 HDGFL3Q9Y3E1 203 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 INSIG2Q9Y5U4 225 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 FLVCR1Q9Y5Y0 555 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ENPP4Q9Y6X5 453 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 TRIP11Q15643 1979 aa2.21□□□□□ -2.06
HMGN4-202ENST00000477243 ABCA4P78363 2273 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 PKDREJQ9NTG1 2253 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DOCK7Q96N67 2140 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 TRAV8-3A0A0A6YYJ7 113 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 IGHV2-26A0A0B4J1V2 119 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 A0A0G2JN53 185 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 LOC389332A0A1B0GUA5 103 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 WI2-2373I1.2A0A1W2PRP0 233 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 hADV38S2A0JD32 116 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 MYBPHLA2RUH7 354 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 PMS2P5A8MQ11 134 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 F5H5P2 479 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 AIPO00170 330 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SAP18O00422 153 aaKnown RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 HMGB3O15347 200 aaKnown RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ANGPTL7O43827 346 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SPAG7O75391 227 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DUSP14O95147 198 aaKnown RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 CDRT1O95170 752 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 TOMM40O96008 361 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 IGHV3-48P01763 117 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 TFPTP0C1Z6 253 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 OR4Q2P0C623 313 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 OR12D1P0DN82 309 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SPI1P17947 270 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 CXCL2P19875 107 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 CD70P32970 193 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 PRSS3P35030 304 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 MAP2K4P45985 399 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 REG1BP48304 166 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF133P52736 654 aaPredicted RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 HLA-DRB3P79483 266 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 HPCAP84074 193 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DEFA6Q01524 100 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ADIGQ0VDE8 80 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 PRDX4Q13162 271 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 IRF4Q15306 451 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 RGNQ15493 299 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 LRRC10Q5BKY1 277 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 UBE2NLQ5JXB2 153 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ATAD3CQ5T2N8 411 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 HENMT1Q5T8I9 393 aaKnown RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SPATA31B1PQ5VZV4 182 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 FBXW9Q5XUX1 488 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ZFAND6Q6FIF0 208 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 GOLT1AQ6ZVE7 132 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 C1QL2Q7Z5L3 287 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 TMEM179BQ7Z7N9 219 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 MDP1Q86V88 176 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 LRRC28Q86X40 367 aaPredicted RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF567Q8N184 647 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DEFB125Q8N687 156 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 NRACQ8N912 160 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 OR8J3Q8NGG0 315 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 OR51H1Q8NH63 302 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DDB2Q92466 427 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 NEUROG1Q92886 237 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF524Q96C55 264 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SLC45A3Q96JT2 553 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DNAJC30Q96LL9 226 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 OR7D2Q96RA2 312 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 TBX5Q99593 518 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 PBDC1Q9BVG4 233 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SLC25A2Q9BXI2 301 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 Q9H3A6 140 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 NOX3Q9HBY0 568 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 MMP26Q9NRE1 261 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ACER3Q9NUN7 267 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 MRPL27Q9P0M9 148 aaKnown RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 COPZ2Q9P299 210 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 SSR3Q9UNL2 185 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 ZNF780BQ9Y6R6 833 aa2.2□□□□□ -2.06
HMGN4-202ENST00000477243 DDX60Q8IY21 1712 aaKnown RBP2.2□□□□□ -2.06
HMGN4-202ENST00000477243 CHD5Q8TDI0 1954 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 NUP98P52948 1817 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 FLG2Q5D862 2391 aaPredicted RBP2.19□□□□□ -2.06
HMGN4-202ENST00000477243 SMIM26A0A096LP01 95 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 TRAV8-1A0A0A6YYK1 113 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 BORCS7-ASMTA0A0B4J1R7 106 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 PLAC8L1A1L4L8 177 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 TRAPPC13A5PLN9 417 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 A8MXK9 166 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 C8orf87E5RJ46 101 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 H3BP45 60 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 K7EP13 123 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 UPK1AO00322 258 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 SLC37A4O43826 429 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 COX7A2P2O60397 106 aa2.19□□□□□ -2.06
HMGN4-202ENST00000477243 GCM2O75603 506 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms