RNA–Protein interactions for RNA: ENST00000476964.5

SOX2-OT-207, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 606 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-207ENST00000476964 PXMP4Q9Y6I8 212 aa2.4□□□□□ -2.03
SOX2-OT-207ENST00000476964 CIAO1O76071 339 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 CPSF4O95639 269 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 IGLV3-19P01714 112 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 SLC25A16P16260 332 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 ZNF22P17026 224 aaPredicted RBP2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 RAB4BP61018 213 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 RAB5BP61020 215 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 SYPL2Q5VXT5 272 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 C5orf46Q6UWT4 87 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 SMIM15Q7Z3B0 74 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 Q8NAQ8 132 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 OR10A6Q8NH74 314 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 SLC35B4Q969S0 331 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 DGCR14Q96DF8 476 aaKnown RBP2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 OR8B2Q96RD0 313 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 FAM96AQ9H5X1 160 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 STOML2Q9UJZ1 356 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 HHLA2Q9UM44 414 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 ATAD5Q96QE3 1844 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 NCOA3Q9Y6Q9 1424 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 SEC16AO15027 2179 aa2.39□□□□□ -2.03
SOX2-OT-207ENST00000476964 THSD7AQ9UPZ6 1657 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 IGKV1D-17A0A075B6S4 117 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 LOC105371267A0A1B0GV96 52 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 UBE2L6O14933 153 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 HMGN1P05114 100 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 CTXN2P0C2S0 81 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 HSD11B1P28845 292 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 MARCKSL1P49006 195 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 CCL7P80098 99 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 ALX1Q15699 326 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 PRR14LQ5THK1 2151 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 RASL11AQ6T310 242 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 SDIM1Q6ZPB5 146 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 SPATA31E1Q6ZUB1 1445 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 ZNF550Q7Z398 422 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 PACRGLQ8N7B6 248 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 OR11H1Q8NG94 326 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 OR2D3Q8NGH3 330 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 RAB2BQ8WUD1 216 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 VPS29Q9UBQ0 182 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 VPREB3Q9UKI3 123 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 ANAPC10Q9UM13 185 aa2.38□□□□□ -2.03
SOX2-OT-207ENST00000476964 COL1A2P08123 1366 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 MTUS2Q5JR59 1369 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 A0A1B0GU33 70 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 GNG14A0A1W2PPG7 69 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CLDN24A6NM45 220 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 C2orf74A8MZ97 194 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 TP53I11O14683 189 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 IGKV1-17P01599 117 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 FAM228BP0C875 321 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 IGHV3-30-3P0DP02 117 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CD79AP11912 226 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CCL1P22362 96 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 S100A1P23297 94 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CRYBB3P26998 211 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 TSPEAR-AS2P59090 65 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 RANP62826 216 aaKnown RBP2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 HOXC5Q00444 222 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 SRSF6Q13247 344 aaKnown RBP2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 PLPPR5Q32ZL2 321 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 C3orf33Q6P1S2 294 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 AMTNQ6UX39 209 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CALHM3Q86XJ0 350 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 LYPD1Q8N2G4 141 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CLDN22Q8N7P3 220 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 DAND5Q8N907 189 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 MUC7Q8TAX7 377 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 CPNE2Q96FN4 548 aaPredicted RBP2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 HIGD2AQ9BW72 106 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 MND1Q9BWT6 205 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 C6orf62Q9GZU0 229 aaPredicted RBP2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 BATF3Q9NR55 127 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 ZNF337Q9Y3M9 751 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 NAV1Q8NEY1 1877 aa2.37□□□□□ -2.03
SOX2-OT-207ENST00000476964 NID2Q14112 1375 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 ZFYVE9O95405 1425 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 NCOA1Q15788 1441 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 IGKV2-24A0A0C4DH68 120 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 LOC102725191A0A1B0GVB3 256 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 VPS37CA5D8V6 355 aaPredicted RBP2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 OR6C6A6NF89 314 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 KPNA3O00505 521 aaPredicted RBP2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 COX7A2LO14548 114 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 PSCAO43653 123 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 LY6HO94772 140 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 APOMO95445 188 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 SOD1P00441 154 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 RNASE2P10153 161 aaKnown RBP2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 ALOX5APP20292 161 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 NPPCP23582 126 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 LPAR6P43657 344 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 SERPINB10P48595 397 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 IFITM2Q01629 132 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 FABP9Q0Z7S8 132 aa2.36□□□□□ -2.03
SOX2-OT-207ENST00000476964 HTR4Q13639 388 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms